Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AL353779.1-201ENST00000434793 351 ntBASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SDHAP3-202ENST00000515467 728 ntBASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AP005018.1-201ENST00000525475 301 ntBASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC044860.1-202ENST00000559481 777 ntBASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AL132655.2-201ENST00000596276 594 ntBASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC025048.6-201ENST00000634326 1161 ntBASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 MYO15B-237ENST00000642007 4893 ntBASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC092127.1-201ENST00000567093 3455 ntBASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 RN7SL692P-201ENST00000464677 288 ntBASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 DOC2GP-202ENST00000514950 1163 ntBASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AL512361.1-201ENST00000554200 418 ntBASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC010336.2-201ENST00000564226 506 ntBASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC104794.3-201ENST00000566840 1248 ntBASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC004840.1-201ENST00000636359 365 ntBASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms