Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA9Q9Y5G4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
PCDHGA9Q9Y5G4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA9Q9Y5G4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA9Q9Y5G4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHGA9Q9Y5G4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA9Q9Y5G4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA9Q9Y5G4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA9Q9Y5G4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA9Q9Y5G4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDHGA9Q9Y5G4 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.71■■□□□ 1.07
PCDHGA9Q9Y5G4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.71■■□□□ 1.07
PCDHGA9Q9Y5G4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA9Q9Y5G4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA9Q9Y5G4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGA9Q9Y5G4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGA9Q9Y5G4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHGA9Q9Y5G4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGA9Q9Y5G4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHGA9Q9Y5G4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA9Q9Y5G4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA9Q9Y5G4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHGA9Q9Y5G4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHGA9Q9Y5G4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA9Q9Y5G4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.69■■□□□ 1.06
PCDHGA9Q9Y5G4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
PCDHGA9Q9Y5G4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PCDHGA9Q9Y5G4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA9Q9Y5G4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PCDHGA9Q9Y5G4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA9Q9Y5G4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA9Q9Y5G4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA9Q9Y5G4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA9Q9Y5G4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA9Q9Y5G4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PCDHGA9Q9Y5G4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHGA9Q9Y5G4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA9Q9Y5G4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHGA9Q9Y5G4 DUSP8P4-201ENST00000399538 1761 ntBASIC21.67■■□□□ 1.06
PCDHGA9Q9Y5G4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA9Q9Y5G4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA9Q9Y5G4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHGA9Q9Y5G4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHGA9Q9Y5G4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHGA9Q9Y5G4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA9Q9Y5G4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA9Q9Y5G4 AC093323.1-202ENST00000635031 2045 ntBASIC21.66■■□□□ 1.06
PCDHGA9Q9Y5G4 FOXO3B-201ENST00000395675 1928 ntBASIC21.65■■□□□ 1.06
PCDHGA9Q9Y5G4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA9Q9Y5G4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.65■■□□□ 1.06
PCDHGA9Q9Y5G4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.65■■□□□ 1.06
PCDHGA9Q9Y5G4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA9Q9Y5G4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PCDHGA9Q9Y5G4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHGA9Q9Y5G4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHGA9Q9Y5G4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA9Q9Y5G4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHGA9Q9Y5G4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGA9Q9Y5G4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGA9Q9Y5G4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA9Q9Y5G4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA9Q9Y5G4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.64■■□□□ 1.05
PCDHGA9Q9Y5G4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHGA9Q9Y5G4 MIR6722-201ENST00000617286 78 ntBASIC21.64■■□□□ 1.05
PCDHGA9Q9Y5G4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.64■■□□□ 1.05
PCDHGA9Q9Y5G4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.64■■□□□ 1.05
PCDHGA9Q9Y5G4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.05
PCDHGA9Q9Y5G4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA9Q9Y5G4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
PCDHGA9Q9Y5G4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA9Q9Y5G4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHGA9Q9Y5G4 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.63■■□□□ 1.05
PCDHGA9Q9Y5G4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PCDHGA9Q9Y5G4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA9Q9Y5G4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA9Q9Y5G4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA9Q9Y5G4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA9Q9Y5G4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA9Q9Y5G4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA9Q9Y5G4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PCDHGA9Q9Y5G4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA9Q9Y5G4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA9Q9Y5G4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA9Q9Y5G4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA9Q9Y5G4 AC106739.1-201ENST00000617035 715 ntBASIC21.62■■□□□ 1.05
PCDHGA9Q9Y5G4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA9Q9Y5G4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHGA9Q9Y5G4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA9Q9Y5G4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
PCDHGA9Q9Y5G4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA9Q9Y5G4 SNX5-217ENST00000606557 1087 ntBASIC21.61■■□□□ 1.05
PCDHGA9Q9Y5G4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.61■■□□□ 1.05
PCDHGA9Q9Y5G4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA9Q9Y5G4 AC092803.2-201ENST00000564287 1899 ntBASIC21.6■■□□□ 1.05
PCDHGA9Q9Y5G4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA9Q9Y5G4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA9Q9Y5G4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.6■■□□□ 1.05
PCDHGA9Q9Y5G4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHGA9Q9Y5G4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDHGA9Q9Y5G4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms