Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
PCDHGB3Q9Y5G1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
PCDHGB3Q9Y5G1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGB3Q9Y5G1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHGB3Q9Y5G1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGB3Q9Y5G1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.91■■□□□ 1.1
PCDHGB3Q9Y5G1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDHGB3Q9Y5G1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGB3Q9Y5G1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGB3Q9Y5G1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGB3Q9Y5G1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHGB3Q9Y5G1 RPS2P7-201ENST00000447334 885 ntBASIC21.9■■□□□ 1.1
PCDHGB3Q9Y5G1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHGB3Q9Y5G1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGB3Q9Y5G1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGB3Q9Y5G1 FOXO3B-201ENST00000395675 1928 ntBASIC21.9■■□□□ 1.1
PCDHGB3Q9Y5G1 AC012676.1-201ENST00000574705 1949 ntBASIC21.9■■□□□ 1.1
PCDHGB3Q9Y5G1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGB3Q9Y5G1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHGB3Q9Y5G1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHGB3Q9Y5G1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.89■■□□□ 1.09
PCDHGB3Q9Y5G1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
PCDHGB3Q9Y5G1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGB3Q9Y5G1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGB3Q9Y5G1 AC133561.1-201ENST00000568600 2415 ntBASIC21.88■■□□□ 1.09
PCDHGB3Q9Y5G1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGB3Q9Y5G1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
PCDHGB3Q9Y5G1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHGB3Q9Y5G1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHGB3Q9Y5G1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGB3Q9Y5G1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGB3Q9Y5G1 RARRES2P1-201ENST00000474487 481 ntBASIC21.88■■□□□ 1.09
PCDHGB3Q9Y5G1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHGB3Q9Y5G1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGB3Q9Y5G1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PCDHGB3Q9Y5G1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGB3Q9Y5G1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGB3Q9Y5G1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGB3Q9Y5G1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGB3Q9Y5G1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHGB3Q9Y5G1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHGB3Q9Y5G1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGB3Q9Y5G1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGB3Q9Y5G1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.87■■□□□ 1.09
PCDHGB3Q9Y5G1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHGB3Q9Y5G1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.87■■□□□ 1.09
PCDHGB3Q9Y5G1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PCDHGB3Q9Y5G1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGB3Q9Y5G1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PCDHGB3Q9Y5G1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
PCDHGB3Q9Y5G1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGB3Q9Y5G1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PCDHGB3Q9Y5G1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDHGB3Q9Y5G1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDHGB3Q9Y5G1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGB3Q9Y5G1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGB3Q9Y5G1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHGB3Q9Y5G1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHGB3Q9Y5G1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHGB3Q9Y5G1 BHLHE23-202ENST00000612929 1109 ntBASIC21.86■■□□□ 1.09
PCDHGB3Q9Y5G1 MIR6089-201ENST00000616698 64 ntBASIC21.86■■□□□ 1.09
PCDHGB3Q9Y5G1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGB3Q9Y5G1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGB3Q9Y5G1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGB3Q9Y5G1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGB3Q9Y5G1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGB3Q9Y5G1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGB3Q9Y5G1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGB3Q9Y5G1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGB3Q9Y5G1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHGB3Q9Y5G1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGB3Q9Y5G1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGB3Q9Y5G1 AC139795.1-202ENST00000500444 432 ntBASIC21.85■■□□□ 1.09
PCDHGB3Q9Y5G1 AC087393.1-201ENST00000582896 145 ntBASIC21.85■■□□□ 1.09
PCDHGB3Q9Y5G1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGB3Q9Y5G1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHGB3Q9Y5G1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGB3Q9Y5G1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGB3Q9Y5G1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGB3Q9Y5G1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGB3Q9Y5G1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGB3Q9Y5G1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHGB3Q9Y5G1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGB3Q9Y5G1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGB3Q9Y5G1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGB3Q9Y5G1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
PCDHGB3Q9Y5G1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
PCDHGB3Q9Y5G1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGB3Q9Y5G1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGB3Q9Y5G1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGB3Q9Y5G1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGB3Q9Y5G1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGB3Q9Y5G1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGB3Q9Y5G1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGB3Q9Y5G1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDHGB3Q9Y5G1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDHGB3Q9Y5G1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGB3Q9Y5G1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGB3Q9Y5G1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHGB3Q9Y5G1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms