Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.61■■□□□ 1.37
SIT1Q9Y3P8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SIT1Q9Y3P8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.6■■□□□ 1.37
SIT1Q9Y3P8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.6■■□□□ 1.37
SIT1Q9Y3P8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.6■■□□□ 1.37
SIT1Q9Y3P8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.6■■□□□ 1.37
SIT1Q9Y3P8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.6■■□□□ 1.37
SIT1Q9Y3P8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.6■■□□□ 1.37
SIT1Q9Y3P8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.6■■□□□ 1.37
SIT1Q9Y3P8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SIT1Q9Y3P8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.59■■□□□ 1.37
SIT1Q9Y3P8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SIT1Q9Y3P8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.59■■□□□ 1.37
SIT1Q9Y3P8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.59■■□□□ 1.37
SIT1Q9Y3P8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SIT1Q9Y3P8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SIT1Q9Y3P8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
SIT1Q9Y3P8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.59■■□□□ 1.37
SIT1Q9Y3P8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.59■■□□□ 1.37
SIT1Q9Y3P8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SIT1Q9Y3P8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SIT1Q9Y3P8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
SIT1Q9Y3P8 AC099791.1-201ENST00000416440 715 ntBASIC23.58■■□□□ 1.37
SIT1Q9Y3P8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.58■■□□□ 1.37
SIT1Q9Y3P8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.58■■□□□ 1.37
SIT1Q9Y3P8 AC011298.3-201ENST00000615796 283 ntBASIC23.58■■□□□ 1.37
SIT1Q9Y3P8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SIT1Q9Y3P8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SIT1Q9Y3P8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.57■■□□□ 1.36
SIT1Q9Y3P8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.57■■□□□ 1.36
SIT1Q9Y3P8 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.57■■□□□ 1.36
SIT1Q9Y3P8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.57■■□□□ 1.36
SIT1Q9Y3P8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.57■■□□□ 1.36
SIT1Q9Y3P8 AC099791.2-201ENST00000605725 427 ntBASIC23.57■■□□□ 1.36
SIT1Q9Y3P8 AL138724.1-201ENST00000606771 1088 ntBASIC23.57■■□□□ 1.36
SIT1Q9Y3P8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.57■■□□□ 1.36
SIT1Q9Y3P8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.57■■□□□ 1.36
SIT1Q9Y3P8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.56■■□□□ 1.36
SIT1Q9Y3P8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SIT1Q9Y3P8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.56■■□□□ 1.36
SIT1Q9Y3P8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.56■■□□□ 1.36
SIT1Q9Y3P8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SIT1Q9Y3P8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.56■■□□□ 1.36
SIT1Q9Y3P8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SIT1Q9Y3P8 AC139426.1-201ENST00000568218 2529 ntBASIC23.56■■□□□ 1.36
SIT1Q9Y3P8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.56■■□□□ 1.36
SIT1Q9Y3P8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
SIT1Q9Y3P8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SIT1Q9Y3P8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
SIT1Q9Y3P8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.55■■□□□ 1.36
SIT1Q9Y3P8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.55■■□□□ 1.36
SIT1Q9Y3P8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.55■■□□□ 1.36
SIT1Q9Y3P8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.55■■□□□ 1.36
SIT1Q9Y3P8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.55■■□□□ 1.36
SIT1Q9Y3P8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.55■■□□□ 1.36
SIT1Q9Y3P8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SIT1Q9Y3P8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SIT1Q9Y3P8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.54■■□□□ 1.36
SIT1Q9Y3P8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SIT1Q9Y3P8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SIT1Q9Y3P8 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SIT1Q9Y3P8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SIT1Q9Y3P8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
SIT1Q9Y3P8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SIT1Q9Y3P8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SIT1Q9Y3P8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.52■■□□□ 1.36
SIT1Q9Y3P8 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.52■■□□□ 1.36
SIT1Q9Y3P8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
SIT1Q9Y3P8 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.52■■□□□ 1.36
SIT1Q9Y3P8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SIT1Q9Y3P8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SIT1Q9Y3P8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SIT1Q9Y3P8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SIT1Q9Y3P8 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.52■■□□□ 1.36
SIT1Q9Y3P8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SIT1Q9Y3P8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SIT1Q9Y3P8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.52■■□□□ 1.35
SIT1Q9Y3P8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SIT1Q9Y3P8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SIT1Q9Y3P8 AC034268.1-201ENST00000441047 882 ntBASIC23.51■■□□□ 1.35
SIT1Q9Y3P8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SIT1Q9Y3P8 AC022517.1-201ENST00000592429 346 ntBASIC23.51■■□□□ 1.35
SIT1Q9Y3P8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SIT1Q9Y3P8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
SIT1Q9Y3P8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SIT1Q9Y3P8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SIT1Q9Y3P8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SIT1Q9Y3P8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SIT1Q9Y3P8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.5■■□□□ 1.35
SIT1Q9Y3P8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SIT1Q9Y3P8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.5■■□□□ 1.35
SIT1Q9Y3P8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.5■■□□□ 1.35
SIT1Q9Y3P8 IKBKGP1-201ENST00000612193 1073 ntBASIC23.5■■□□□ 1.35
SIT1Q9Y3P8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SIT1Q9Y3P8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SIT1Q9Y3P8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SIT1Q9Y3P8 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.49■■□□□ 1.35
SIT1Q9Y3P8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.49■■□□□ 1.35
SIT1Q9Y3P8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.49■■□□□ 1.35
SIT1Q9Y3P8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms