Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AC004448.1-201ENST00000458332 883 ntBASIC32.04■■■□□ 2.72
NINLQ9Y2I6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC32.04■■■□□ 2.72
NINLQ9Y2I6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC32.03■■■□□ 2.72
NINLQ9Y2I6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
NINLQ9Y2I6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC32.03■■■□□ 2.72
NINLQ9Y2I6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC32.03■■■□□ 2.72
NINLQ9Y2I6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC32.02■■■□□ 2.72
NINLQ9Y2I6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
NINLQ9Y2I6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
NINLQ9Y2I6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
NINLQ9Y2I6 SRR-208ENST00000576848 588 ntTSL 4 BASIC32.02■■■□□ 2.72
NINLQ9Y2I6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC32.01■■■□□ 2.71
NINLQ9Y2I6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
NINLQ9Y2I6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
NINLQ9Y2I6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.71
NINLQ9Y2I6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.71
NINLQ9Y2I6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
NINLQ9Y2I6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
NINLQ9Y2I6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC32■■■□□ 2.71
NINLQ9Y2I6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
NINLQ9Y2I6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC32■■■□□ 2.71
NINLQ9Y2I6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC32■■■□□ 2.71
NINLQ9Y2I6 AL356740.2-201ENST00000601559 647 ntBASIC32■■■□□ 2.71
NINLQ9Y2I6 AL512631.2-201ENST00000604634 923 ntBASIC32■■■□□ 2.71
NINLQ9Y2I6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC32■■■□□ 2.71
NINLQ9Y2I6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC31.99■■■□□ 2.71
NINLQ9Y2I6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC31.99■■■□□ 2.71
NINLQ9Y2I6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC31.99■■■□□ 2.71
NINLQ9Y2I6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
NINLQ9Y2I6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
NINLQ9Y2I6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC31.98■■■□□ 2.71
NINLQ9Y2I6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC31.98■■■□□ 2.71
NINLQ9Y2I6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
NINLQ9Y2I6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC31.98■■■□□ 2.71
NINLQ9Y2I6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC31.98■■■□□ 2.71
NINLQ9Y2I6 AL139246.5-201ENST00000606645 996 ntBASIC31.98■■■□□ 2.71
NINLQ9Y2I6 AC092666.2-201ENST00000613287 246 ntBASIC31.98■■■□□ 2.71
NINLQ9Y2I6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
NINLQ9Y2I6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
NINLQ9Y2I6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC31.98■■■□□ 2.71
NINLQ9Y2I6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
NINLQ9Y2I6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
NINLQ9Y2I6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
NINLQ9Y2I6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC31.97■■■□□ 2.71
NINLQ9Y2I6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC31.97■■■□□ 2.71
NINLQ9Y2I6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
NINLQ9Y2I6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
NINLQ9Y2I6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC31.97■■■□□ 2.71
NINLQ9Y2I6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
NINLQ9Y2I6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
NINLQ9Y2I6 AC131274.2-201ENST00000580697 1507 ntBASIC31.96■■■□□ 2.71
NINLQ9Y2I6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC31.96■■■□□ 2.71
NINLQ9Y2I6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
NINLQ9Y2I6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
NINLQ9Y2I6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC31.95■■■□□ 2.71
NINLQ9Y2I6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
NINLQ9Y2I6 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.95■■■□□ 2.71
NINLQ9Y2I6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
NINLQ9Y2I6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.71
NINLQ9Y2I6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
NINLQ9Y2I6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
NINLQ9Y2I6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC31.94■■■□□ 2.7
NINLQ9Y2I6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC31.94■■■□□ 2.7
NINLQ9Y2I6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
NINLQ9Y2I6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
NINLQ9Y2I6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC31.94■■■□□ 2.7
NINLQ9Y2I6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC31.94■■■□□ 2.7
NINLQ9Y2I6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
NINLQ9Y2I6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
NINLQ9Y2I6 AK3-203ENST00000447596 705 ntTSL 2 BASIC31.94■■■□□ 2.7
NINLQ9Y2I6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC31.94■■■□□ 2.7
NINLQ9Y2I6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
NINLQ9Y2I6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
NINLQ9Y2I6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC31.93■■■□□ 2.7
NINLQ9Y2I6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
NINLQ9Y2I6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC31.93■■■□□ 2.7
NINLQ9Y2I6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
NINLQ9Y2I6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC31.93■■■□□ 2.7
NINLQ9Y2I6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
NINLQ9Y2I6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
NINLQ9Y2I6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
NINLQ9Y2I6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC31.92■■■□□ 2.7
NINLQ9Y2I6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
NINLQ9Y2I6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
NINLQ9Y2I6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
NINLQ9Y2I6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
NINLQ9Y2I6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC31.91■■■□□ 2.7
NINLQ9Y2I6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC31.91■■■□□ 2.7
NINLQ9Y2I6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
NINLQ9Y2I6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
NINLQ9Y2I6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC31.91■■■□□ 2.7
NINLQ9Y2I6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC31.91■■■□□ 2.7
NINLQ9Y2I6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
NINLQ9Y2I6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
NINLQ9Y2I6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC31.9■■■□□ 2.7
NINLQ9Y2I6 MIR4466-201ENST00000606121 54 ntBASIC31.9■■■□□ 2.7
NINLQ9Y2I6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC31.9■■■□□ 2.7
NINLQ9Y2I6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC31.89■■■□□ 2.7
NINLQ9Y2I6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
NINLQ9Y2I6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms