Protein–RNA interactions for Protein: Q9UQV4

LAMP3, Lysosome-associated membrane glycoprotein 3, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3Q9UQV4 MIR935-201ENST00000401179 91 ntBASIC20.09■□□□□ 0.81
LAMP3Q9UQV4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.09■□□□□ 0.81
LAMP3Q9UQV4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.09■□□□□ 0.81
LAMP3Q9UQV4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LAMP3Q9UQV4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.09■□□□□ 0.81
LAMP3Q9UQV4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.09■□□□□ 0.81
LAMP3Q9UQV4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LAMP3Q9UQV4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LAMP3Q9UQV4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LAMP3Q9UQV4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LAMP3Q9UQV4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LAMP3Q9UQV4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LAMP3Q9UQV4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LAMP3Q9UQV4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.08■□□□□ 0.81
LAMP3Q9UQV4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.08■□□□□ 0.81
LAMP3Q9UQV4 MIR3621-201ENST00000580529 85 ntBASIC20.08■□□□□ 0.81
LAMP3Q9UQV4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.08■□□□□ 0.81
LAMP3Q9UQV4 AL139246.5-201ENST00000606645 996 ntBASIC20.08■□□□□ 0.81
LAMP3Q9UQV4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
LAMP3Q9UQV4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
LAMP3Q9UQV4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LAMP3Q9UQV4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.08■□□□□ 0.8
LAMP3Q9UQV4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LAMP3Q9UQV4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LAMP3Q9UQV4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.07■□□□□ 0.8
LAMP3Q9UQV4 MIR638-201ENST00000385237 100 ntBASIC20.07■□□□□ 0.8
LAMP3Q9UQV4 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.07■□□□□ 0.8
LAMP3Q9UQV4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.07■□□□□ 0.8
LAMP3Q9UQV4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.07■□□□□ 0.8
LAMP3Q9UQV4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LAMP3Q9UQV4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
LAMP3Q9UQV4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LAMP3Q9UQV4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
LAMP3Q9UQV4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
LAMP3Q9UQV4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.06■□□□□ 0.8
LAMP3Q9UQV4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.06■□□□□ 0.8
LAMP3Q9UQV4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LAMP3Q9UQV4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.06■□□□□ 0.8
LAMP3Q9UQV4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LAMP3Q9UQV4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LAMP3Q9UQV4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LAMP3Q9UQV4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LAMP3Q9UQV4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.05■□□□□ 0.8
LAMP3Q9UQV4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
LAMP3Q9UQV4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LAMP3Q9UQV4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LAMP3Q9UQV4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LAMP3Q9UQV4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LAMP3Q9UQV4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LAMP3Q9UQV4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LAMP3Q9UQV4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LAMP3Q9UQV4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
LAMP3Q9UQV4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LAMP3Q9UQV4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.04■□□□□ 0.8
LAMP3Q9UQV4 AF131216.4-201ENST00000638924 1588 ntBASIC20.04■□□□□ 0.8
LAMP3Q9UQV4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.04■□□□□ 0.8
LAMP3Q9UQV4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LAMP3Q9UQV4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LAMP3Q9UQV4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LAMP3Q9UQV4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.04■□□□□ 0.8
LAMP3Q9UQV4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LAMP3Q9UQV4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
LAMP3Q9UQV4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.04■□□□□ 0.8
LAMP3Q9UQV4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LAMP3Q9UQV4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
LAMP3Q9UQV4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LAMP3Q9UQV4 AC020928.2-201ENST00000588717 2197 ntBASIC20.04■□□□□ 0.8
LAMP3Q9UQV4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LAMP3Q9UQV4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LAMP3Q9UQV4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.03■□□□□ 0.8
LAMP3Q9UQV4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LAMP3Q9UQV4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LAMP3Q9UQV4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.03■□□□□ 0.8
LAMP3Q9UQV4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.03■□□□□ 0.8
LAMP3Q9UQV4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LAMP3Q9UQV4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LAMP3Q9UQV4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.03■□□□□ 0.8
LAMP3Q9UQV4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LAMP3Q9UQV4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.02■□□□□ 0.8
LAMP3Q9UQV4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LAMP3Q9UQV4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LAMP3Q9UQV4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LAMP3Q9UQV4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
LAMP3Q9UQV4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LAMP3Q9UQV4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LAMP3Q9UQV4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LAMP3Q9UQV4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.01■□□□□ 0.79
LAMP3Q9UQV4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.01■□□□□ 0.79
LAMP3Q9UQV4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.01■□□□□ 0.79
LAMP3Q9UQV4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LAMP3Q9UQV4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LAMP3Q9UQV4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LAMP3Q9UQV4 ERN1-208ENST00000606895 2068 ntBASIC20■□□□□ 0.79
LAMP3Q9UQV4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LAMP3Q9UQV4 CD72-202ENST00000378430 585 ntTSL 3 BASIC20■□□□□ 0.79
LAMP3Q9UQV4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
LAMP3Q9UQV4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20■□□□□ 0.79
LAMP3Q9UQV4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LAMP3Q9UQV4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LAMP3Q9UQV4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms