Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC9.87□□□□□ -0.83
MACF1Q9UPN3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC9.87□□□□□ -0.83
MACF1Q9UPN3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MACF1Q9UPN3 PTCHD3P2-201ENST00000424937 1205 ntBASIC9.87□□□□□ -0.83
MACF1Q9UPN3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC9.87□□□□□ -0.83
MACF1Q9UPN3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC9.87□□□□□ -0.83
MACF1Q9UPN3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC9.87□□□□□ -0.83
MACF1Q9UPN3 AC233992.3-201ENST00000607491 485 ntBASIC9.87□□□□□ -0.83
MACF1Q9UPN3 AC100797.4-201ENST00000631653 1827 ntBASIC9.87□□□□□ -0.83
MACF1Q9UPN3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC9.86□□□□□ -0.83
MACF1Q9UPN3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
MACF1Q9UPN3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
MACF1Q9UPN3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC9.86□□□□□ -0.83
MACF1Q9UPN3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
MACF1Q9UPN3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
MACF1Q9UPN3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC9.86□□□□□ -0.83
MACF1Q9UPN3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC9.86□□□□□ -0.83
MACF1Q9UPN3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
MACF1Q9UPN3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
MACF1Q9UPN3 GPX1P1-201ENST00000388829 606 ntBASIC9.86□□□□□ -0.83
MACF1Q9UPN3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
MACF1Q9UPN3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
MACF1Q9UPN3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
MACF1Q9UPN3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
MACF1Q9UPN3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
MACF1Q9UPN3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC9.86□□□□□ -0.83
MACF1Q9UPN3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC9.86□□□□□ -0.83
MACF1Q9UPN3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC9.86□□□□□ -0.83
MACF1Q9UPN3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
MACF1Q9UPN3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
MACF1Q9UPN3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
MACF1Q9UPN3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
MACF1Q9UPN3 BID-214ENST00000617586 542 ntTSL 5 BASIC9.85□□□□□ -0.83
MACF1Q9UPN3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
MACF1Q9UPN3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC9.85□□□□□ -0.83
MACF1Q9UPN3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
MACF1Q9UPN3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC9.85□□□□□ -0.83
MACF1Q9UPN3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC9.85□□□□□ -0.83
MACF1Q9UPN3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
MACF1Q9UPN3 KRT18P29-201ENST00000397031 1267 ntBASIC9.85□□□□□ -0.83
MACF1Q9UPN3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
MACF1Q9UPN3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 POU5F1P3-201ENST00000428824 1078 ntBASIC9.84□□□□□ -0.83
MACF1Q9UPN3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 AC011298.3-201ENST00000615796 283 ntBASIC9.84□□□□□ -0.83
MACF1Q9UPN3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 PPP1R14BP3-201ENST00000509033 445 ntBASIC9.84□□□□□ -0.83
MACF1Q9UPN3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 ECEL1P3-201ENST00000427961 737 ntBASIC9.84□□□□□ -0.83
MACF1Q9UPN3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 KRT18P14-201ENST00000534205 1250 ntBASIC9.84□□□□□ -0.83
MACF1Q9UPN3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 AL138781.1-201ENST00000566567 1274 ntBASIC9.84□□□□□ -0.83
MACF1Q9UPN3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC9.84□□□□□ -0.83
MACF1Q9UPN3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC9.83□□□□□ -0.84
MACF1Q9UPN3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
MACF1Q9UPN3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
MACF1Q9UPN3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
MACF1Q9UPN3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC9.83□□□□□ -0.84
MACF1Q9UPN3 AL445228.2-201ENST00000605589 952 ntBASIC9.83□□□□□ -0.84
MACF1Q9UPN3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
MACF1Q9UPN3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC9.83□□□□□ -0.84
MACF1Q9UPN3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
MACF1Q9UPN3 NME4-202ENST00000382940 766 ntTSL 3 BASIC9.83□□□□□ -0.84
MACF1Q9UPN3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC9.83□□□□□ -0.84
MACF1Q9UPN3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC9.83□□□□□ -0.84
MACF1Q9UPN3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
MACF1Q9UPN3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
MACF1Q9UPN3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
MACF1Q9UPN3 AC012414.1-201ENST00000556676 535 ntBASIC9.83□□□□□ -0.84
MACF1Q9UPN3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
MACF1Q9UPN3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC9.83□□□□□ -0.84
MACF1Q9UPN3 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
MACF1Q9UPN3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
MACF1Q9UPN3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC9.82□□□□□ -0.84
MACF1Q9UPN3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
MACF1Q9UPN3 TSPY26P-201ENST00000476365 1326 ntBASIC9.82□□□□□ -0.84
MACF1Q9UPN3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC9.82□□□□□ -0.84
MACF1Q9UPN3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
MACF1Q9UPN3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC9.82□□□□□ -0.84
MACF1Q9UPN3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC9.82□□□□□ -0.84
MACF1Q9UPN3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
MACF1Q9UPN3 MIR4497-201ENST00000583208 89 ntBASIC9.82□□□□□ -0.84
MACF1Q9UPN3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms