Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
PCDHA6Q9UN73 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
PCDHA6Q9UN73 GUSBP5-201ENST00000418136 578 ntBASIC26.7■■□□□ 1.86
PCDHA6Q9UN73 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHA6Q9UN73 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.7■■□□□ 1.86
PCDHA6Q9UN73 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.7■■□□□ 1.86
PCDHA6Q9UN73 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHA6Q9UN73 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
PCDHA6Q9UN73 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA6Q9UN73 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA6Q9UN73 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
PCDHA6Q9UN73 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.69■■□□□ 1.86
PCDHA6Q9UN73 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA6Q9UN73 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.69■■□□□ 1.86
PCDHA6Q9UN73 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA6Q9UN73 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA6Q9UN73 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
PCDHA6Q9UN73 AC021242.3-201ENST00000607598 1377 ntBASIC26.69■■□□□ 1.86
PCDHA6Q9UN73 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA6Q9UN73 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHA6Q9UN73 KRT125P-201ENST00000546827 989 ntBASIC26.68■■□□□ 1.86
PCDHA6Q9UN73 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHA6Q9UN73 AF131216.4-201ENST00000638924 1588 ntBASIC26.67■■□□□ 1.86
PCDHA6Q9UN73 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDHA6Q9UN73 HLA-L-211ENST00000482052 1765 ntBASIC26.67■■□□□ 1.86
PCDHA6Q9UN73 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.67■■□□□ 1.86
PCDHA6Q9UN73 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.67■■□□□ 1.86
PCDHA6Q9UN73 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDHA6Q9UN73 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.67■■□□□ 1.86
PCDHA6Q9UN73 MIR4787-201ENST00000607364 84 ntBASIC26.67■■□□□ 1.86
PCDHA6Q9UN73 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHA6Q9UN73 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHA6Q9UN73 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
PCDHA6Q9UN73 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHA6Q9UN73 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.66■■□□□ 1.86
PCDHA6Q9UN73 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
PCDHA6Q9UN73 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHA6Q9UN73 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.65■■□□□ 1.86
PCDHA6Q9UN73 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.65■■□□□ 1.86
PCDHA6Q9UN73 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHA6Q9UN73 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHA6Q9UN73 AL139125.2-201ENST00000623134 1869 ntBASIC26.64■■□□□ 1.86
PCDHA6Q9UN73 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHA6Q9UN73 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHA6Q9UN73 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHA6Q9UN73 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.64■■□□□ 1.86
PCDHA6Q9UN73 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.64■■□□□ 1.86
PCDHA6Q9UN73 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.64■■□□□ 1.86
PCDHA6Q9UN73 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PCDHA6Q9UN73 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
PCDHA6Q9UN73 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHA6Q9UN73 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHA6Q9UN73 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHA6Q9UN73 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.63■■□□□ 1.85
PCDHA6Q9UN73 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.63■■□□□ 1.85
PCDHA6Q9UN73 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.63■■□□□ 1.85
PCDHA6Q9UN73 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.63■■□□□ 1.85
PCDHA6Q9UN73 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.63■■□□□ 1.85
PCDHA6Q9UN73 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHA6Q9UN73 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHA6Q9UN73 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHA6Q9UN73 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.62■■□□□ 1.85
PCDHA6Q9UN73 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHA6Q9UN73 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHA6Q9UN73 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.62■■□□□ 1.85
PCDHA6Q9UN73 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHA6Q9UN73 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHA6Q9UN73 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.62■■□□□ 1.85
PCDHA6Q9UN73 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
PCDHA6Q9UN73 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHA6Q9UN73 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHA6Q9UN73 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHA6Q9UN73 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHA6Q9UN73 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.61■■□□□ 1.85
PCDHA6Q9UN73 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHA6Q9UN73 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.61■■□□□ 1.85
PCDHA6Q9UN73 AC135731.1-201ENST00000569415 2548 ntBASIC26.6■■□□□ 1.85
PCDHA6Q9UN73 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.6■■□□□ 1.85
PCDHA6Q9UN73 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA6Q9UN73 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.6■■□□□ 1.85
PCDHA6Q9UN73 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA6Q9UN73 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHA6Q9UN73 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
PCDHA6Q9UN73 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.59■■□□□ 1.85
PCDHA6Q9UN73 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.59■■□□□ 1.85
PCDHA6Q9UN73 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.59■■□□□ 1.85
PCDHA6Q9UN73 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
PCDHA6Q9UN73 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHA6Q9UN73 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
PCDHA6Q9UN73 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.59■■□□□ 1.85
PCDHA6Q9UN73 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHA6Q9UN73 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHA6Q9UN73 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.58■■□□□ 1.85
PCDHA6Q9UN73 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.58■■□□□ 1.85
PCDHA6Q9UN73 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHA6Q9UN73 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.58■■□□□ 1.85
PCDHA6Q9UN73 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHA6Q9UN73 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
PCDHA6Q9UN73 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHA6Q9UN73 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms