Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AC096887.2-201ENST00000623443 1957 ntBASIC26.66■■□□□ 1.86
DDX41Q9UJV9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX41Q9UJV9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX41Q9UJV9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX41Q9UJV9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX41Q9UJV9 FOXO3B-201ENST00000395675 1928 ntBASIC26.65■■□□□ 1.86
DDX41Q9UJV9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.65■■□□□ 1.86
DDX41Q9UJV9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
DDX41Q9UJV9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
DDX41Q9UJV9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.65■■□□□ 1.86
DDX41Q9UJV9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX41Q9UJV9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX41Q9UJV9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX41Q9UJV9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
DDX41Q9UJV9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.65■■□□□ 1.86
DDX41Q9UJV9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.64■■□□□ 1.86
DDX41Q9UJV9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
DDX41Q9UJV9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
DDX41Q9UJV9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
DDX41Q9UJV9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
DDX41Q9UJV9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.63■■□□□ 1.85
DDX41Q9UJV9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
DDX41Q9UJV9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.63■■□□□ 1.85
DDX41Q9UJV9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.63■■□□□ 1.85
DDX41Q9UJV9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
DDX41Q9UJV9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
DDX41Q9UJV9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.62■■□□□ 1.85
DDX41Q9UJV9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.62■■□□□ 1.85
DDX41Q9UJV9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.62■■□□□ 1.85
DDX41Q9UJV9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.62■■□□□ 1.85
DDX41Q9UJV9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
DDX41Q9UJV9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
DDX41Q9UJV9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
DDX41Q9UJV9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
DDX41Q9UJV9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
DDX41Q9UJV9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX41Q9UJV9 AC133561.1-201ENST00000568600 2415 ntBASIC26.6■■□□□ 1.85
DDX41Q9UJV9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
DDX41Q9UJV9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
DDX41Q9UJV9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.6■■□□□ 1.85
DDX41Q9UJV9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX41Q9UJV9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
DDX41Q9UJV9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
DDX41Q9UJV9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
DDX41Q9UJV9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.59■■□□□ 1.85
DDX41Q9UJV9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.59■■□□□ 1.85
DDX41Q9UJV9 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
DDX41Q9UJV9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
DDX41Q9UJV9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.59■■□□□ 1.85
DDX41Q9UJV9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.59■■□□□ 1.85
DDX41Q9UJV9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.59■■□□□ 1.85
DDX41Q9UJV9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX41Q9UJV9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX41Q9UJV9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX41Q9UJV9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.58■■□□□ 1.85
DDX41Q9UJV9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX41Q9UJV9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
DDX41Q9UJV9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX41Q9UJV9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
DDX41Q9UJV9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX41Q9UJV9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
DDX41Q9UJV9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
DDX41Q9UJV9 AC097639.1-201ENST00000565519 1891 ntBASIC26.57■■□□□ 1.84
DDX41Q9UJV9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
DDX41Q9UJV9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.57■■□□□ 1.84
DDX41Q9UJV9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.57■■□□□ 1.84
DDX41Q9UJV9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.57■■□□□ 1.84
DDX41Q9UJV9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
DDX41Q9UJV9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
DDX41Q9UJV9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
DDX41Q9UJV9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.56■■□□□ 1.84
DDX41Q9UJV9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
DDX41Q9UJV9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
DDX41Q9UJV9 AC008406.3-201ENST00000620001 1374 ntBASIC26.56■■□□□ 1.84
DDX41Q9UJV9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
DDX41Q9UJV9 AF131216.4-201ENST00000638924 1588 ntBASIC26.55■■□□□ 1.84
DDX41Q9UJV9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
DDX41Q9UJV9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.55■■□□□ 1.84
DDX41Q9UJV9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.55■■□□□ 1.84
DDX41Q9UJV9 AC010501.1-201ENST00000606270 1962 ntBASIC26.55■■□□□ 1.84
DDX41Q9UJV9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
DDX41Q9UJV9 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX41Q9UJV9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.53■■□□□ 1.84
DDX41Q9UJV9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX41Q9UJV9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
DDX41Q9UJV9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
DDX41Q9UJV9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.53■■□□□ 1.84
DDX41Q9UJV9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
DDX41Q9UJV9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
DDX41Q9UJV9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
DDX41Q9UJV9 AC010997.5-201ENST00000609182 354 ntBASIC26.52■■□□□ 1.84
DDX41Q9UJV9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
DDX41Q9UJV9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.84
DDX41Q9UJV9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX41Q9UJV9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.51■■□□□ 1.83
DDX41Q9UJV9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.51■■□□□ 1.83
DDX41Q9UJV9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX41Q9UJV9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.51■■□□□ 1.83
DDX41Q9UJV9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC26.51■■□□□ 1.83
DDX41Q9UJV9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms