Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE1Q9NRR8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE1Q9NRR8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE1Q9NRR8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE1Q9NRR8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE1Q9NRR8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE1Q9NRR8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CDC42SE1Q9NRR8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE1Q9NRR8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC12.09□□□□□ -0.47
CDC42SE1Q9NRR8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE1Q9NRR8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC12.09□□□□□ -0.47
CDC42SE1Q9NRR8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE1Q9NRR8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE1Q9NRR8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CDC42SE1Q9NRR8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE1Q9NRR8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC12.08□□□□□ -0.47
CDC42SE1Q9NRR8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE1Q9NRR8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.08□□□□□ -0.48
CDC42SE1Q9NRR8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE1Q9NRR8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE1Q9NRR8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CDC42SE1Q9NRR8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE1Q9NRR8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CDC42SE1Q9NRR8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC12.08□□□□□ -0.48
CDC42SE1Q9NRR8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE1Q9NRR8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE1Q9NRR8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE1Q9NRR8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CDC42SE1Q9NRR8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE1Q9NRR8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CDC42SE1Q9NRR8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
CDC42SE1Q9NRR8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC12.08□□□□□ -0.48
CDC42SE1Q9NRR8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE1Q9NRR8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE1Q9NRR8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC12.07□□□□□ -0.48
CDC42SE1Q9NRR8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC12.07□□□□□ -0.48
CDC42SE1Q9NRR8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE1Q9NRR8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE1Q9NRR8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE1Q9NRR8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC12.07□□□□□ -0.48
CDC42SE1Q9NRR8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE1Q9NRR8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE1Q9NRR8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE1Q9NRR8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE1Q9NRR8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE1Q9NRR8 AC022211.4-201ENST00000625094 2161 ntBASIC12.07□□□□□ -0.48
CDC42SE1Q9NRR8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CDC42SE1Q9NRR8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CDC42SE1Q9NRR8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE1Q9NRR8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE1Q9NRR8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE1Q9NRR8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE1Q9NRR8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CDC42SE1Q9NRR8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE1Q9NRR8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
CDC42SE1Q9NRR8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE1Q9NRR8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE1Q9NRR8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
CDC42SE1Q9NRR8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC42SE1Q9NRR8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE1Q9NRR8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC42SE1Q9NRR8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE1Q9NRR8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CDC42SE1Q9NRR8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE1Q9NRR8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE1Q9NRR8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE1Q9NRR8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE1Q9NRR8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC12.06□□□□□ -0.48
CDC42SE1Q9NRR8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC42SE1Q9NRR8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE1Q9NRR8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE1Q9NRR8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC12.05□□□□□ -0.48
CDC42SE1Q9NRR8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE1Q9NRR8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE1Q9NRR8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE1Q9NRR8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CDC42SE1Q9NRR8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE1Q9NRR8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE1Q9NRR8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC12.05□□□□□ -0.48
CDC42SE1Q9NRR8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE1Q9NRR8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE1Q9NRR8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC12.05□□□□□ -0.48
CDC42SE1Q9NRR8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CDC42SE1Q9NRR8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE1Q9NRR8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE1Q9NRR8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE1Q9NRR8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE1Q9NRR8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE1Q9NRR8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE1Q9NRR8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC12.04□□□□□ -0.48
CDC42SE1Q9NRR8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CDC42SE1Q9NRR8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE1Q9NRR8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC42SE1Q9NRR8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
CDC42SE1Q9NRR8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE1Q9NRR8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE1Q9NRR8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE1Q9NRR8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CDC42SE1Q9NRR8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE1Q9NRR8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 227.1 ms