Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.93■□□□□ 0.94
HINT3Q9NQE9 FOXO3B-201ENST00000395675 1928 ntBASIC20.93■□□□□ 0.94
HINT3Q9NQE9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HINT3Q9NQE9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HINT3Q9NQE9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HINT3Q9NQE9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HINT3Q9NQE9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.93■□□□□ 0.94
HINT3Q9NQE9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HINT3Q9NQE9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.92■□□□□ 0.94
HINT3Q9NQE9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HINT3Q9NQE9 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.92■□□□□ 0.94
HINT3Q9NQE9 U85056.1-201ENST00000616429 682 ntBASIC20.92■□□□□ 0.94
HINT3Q9NQE9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.92■□□□□ 0.94
HINT3Q9NQE9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HINT3Q9NQE9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
HINT3Q9NQE9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HINT3Q9NQE9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HINT3Q9NQE9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HINT3Q9NQE9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HINT3Q9NQE9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HINT3Q9NQE9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HINT3Q9NQE9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
HINT3Q9NQE9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HINT3Q9NQE9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
HINT3Q9NQE9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HINT3Q9NQE9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.9■□□□□ 0.94
HINT3Q9NQE9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HINT3Q9NQE9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.9■□□□□ 0.94
HINT3Q9NQE9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HINT3Q9NQE9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HINT3Q9NQE9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.9■□□□□ 0.94
HINT3Q9NQE9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.89■□□□□ 0.94
HINT3Q9NQE9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
HINT3Q9NQE9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
HINT3Q9NQE9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HINT3Q9NQE9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
HINT3Q9NQE9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HINT3Q9NQE9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HINT3Q9NQE9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HINT3Q9NQE9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.88■□□□□ 0.93
HINT3Q9NQE9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HINT3Q9NQE9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
HINT3Q9NQE9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
HINT3Q9NQE9 RAP2CP1-202ENST00000605179 643 ntBASIC20.88■□□□□ 0.93
HINT3Q9NQE9 AC133552.2-201ENST00000619106 1032 ntBASIC20.88■□□□□ 0.93
HINT3Q9NQE9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HINT3Q9NQE9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HINT3Q9NQE9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HINT3Q9NQE9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HINT3Q9NQE9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HINT3Q9NQE9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HINT3Q9NQE9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HINT3Q9NQE9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HINT3Q9NQE9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HINT3Q9NQE9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.87■□□□□ 0.93
HINT3Q9NQE9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HINT3Q9NQE9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.87■□□□□ 0.93
HINT3Q9NQE9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HINT3Q9NQE9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HINT3Q9NQE9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HINT3Q9NQE9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
HINT3Q9NQE9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
HINT3Q9NQE9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
HINT3Q9NQE9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.86■□□□□ 0.93
HINT3Q9NQE9 AC009831.1-201ENST00000580420 1582 ntBASIC20.86■□□□□ 0.93
HINT3Q9NQE9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HINT3Q9NQE9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.86■□□□□ 0.93
HINT3Q9NQE9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HINT3Q9NQE9 AC026202.3-201ENST00000600805 1127 ntBASIC20.86■□□□□ 0.93
HINT3Q9NQE9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HINT3Q9NQE9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HINT3Q9NQE9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HINT3Q9NQE9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HINT3Q9NQE9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HINT3Q9NQE9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HINT3Q9NQE9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HINT3Q9NQE9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HINT3Q9NQE9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HINT3Q9NQE9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
HINT3Q9NQE9 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.85■□□□□ 0.93
HINT3Q9NQE9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HINT3Q9NQE9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HINT3Q9NQE9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
HINT3Q9NQE9 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.85■□□□□ 0.93
HINT3Q9NQE9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HINT3Q9NQE9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HINT3Q9NQE9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HINT3Q9NQE9 C9orf163-202ENST00000624034 2573 ntBASIC20.84■□□□□ 0.93
HINT3Q9NQE9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.84■□□□□ 0.93
HINT3Q9NQE9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HINT3Q9NQE9 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.84■□□□□ 0.93
HINT3Q9NQE9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.84■□□□□ 0.93
HINT3Q9NQE9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HINT3Q9NQE9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HINT3Q9NQE9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HINT3Q9NQE9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HINT3Q9NQE9 KRT18P10-201ENST00000388836 1287 ntBASIC20.83■□□□□ 0.93
HINT3Q9NQE9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
HINT3Q9NQE9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HINT3Q9NQE9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms