Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHD8Q9HCK8 BX255925.1-201ENST00000566954 1854 ntBASIC22.14■■□□□ 1.13
CHD8Q9HCK8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHD8Q9HCK8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD8Q9HCK8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.13■■□□□ 1.13
CHD8Q9HCK8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.13■■□□□ 1.13
CHD8Q9HCK8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD8Q9HCK8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.13■■□□□ 1.13
CHD8Q9HCK8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHD8Q9HCK8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.13■■□□□ 1.13
CHD8Q9HCK8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD8Q9HCK8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHD8Q9HCK8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD8Q9HCK8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD8Q9HCK8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD8Q9HCK8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CHD8Q9HCK8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHD8Q9HCK8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.11■■□□□ 1.13
CHD8Q9HCK8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.11■■□□□ 1.13
CHD8Q9HCK8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
CHD8Q9HCK8 AC027612.3-201ENST00000413684 1047 ntBASIC22.11■■□□□ 1.13
CHD8Q9HCK8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.11■■□□□ 1.13
CHD8Q9HCK8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.11■■□□□ 1.13
CHD8Q9HCK8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.11■■□□□ 1.13
CHD8Q9HCK8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.1■■□□□ 1.13
CHD8Q9HCK8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.1■■□□□ 1.13
CHD8Q9HCK8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.1■■□□□ 1.13
CHD8Q9HCK8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.1■■□□□ 1.13
CHD8Q9HCK8 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.1■■□□□ 1.13
CHD8Q9HCK8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.1■■□□□ 1.13
CHD8Q9HCK8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.1■■□□□ 1.13
CHD8Q9HCK8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
CHD8Q9HCK8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHD8Q9HCK8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.09■■□□□ 1.13
CHD8Q9HCK8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
CHD8Q9HCK8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.09■■□□□ 1.13
CHD8Q9HCK8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHD8Q9HCK8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHD8Q9HCK8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.08■■□□□ 1.13
CHD8Q9HCK8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.08■■□□□ 1.13
CHD8Q9HCK8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.08■■□□□ 1.13
CHD8Q9HCK8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CHD8Q9HCK8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CHD8Q9HCK8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
CHD8Q9HCK8 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.08■■□□□ 1.12
CHD8Q9HCK8 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CHD8Q9HCK8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CHD8Q9HCK8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.07■■□□□ 1.12
CHD8Q9HCK8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CHD8Q9HCK8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CHD8Q9HCK8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.07■■□□□ 1.12
CHD8Q9HCK8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CHD8Q9HCK8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CHD8Q9HCK8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.07■■□□□ 1.12
CHD8Q9HCK8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.07■■□□□ 1.12
CHD8Q9HCK8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
CHD8Q9HCK8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.07■■□□□ 1.12
CHD8Q9HCK8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CHD8Q9HCK8 CDCA4P2-201ENST00000441182 718 ntBASIC22.07■■□□□ 1.12
CHD8Q9HCK8 AC080038.1-201ENST00000611274 1154 ntBASIC22.07■■□□□ 1.12
CHD8Q9HCK8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
CHD8Q9HCK8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CHD8Q9HCK8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.06■■□□□ 1.12
CHD8Q9HCK8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CHD8Q9HCK8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.06■■□□□ 1.12
CHD8Q9HCK8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CHD8Q9HCK8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.06■■□□□ 1.12
CHD8Q9HCK8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CHD8Q9HCK8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CHD8Q9HCK8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.05■■□□□ 1.12
CHD8Q9HCK8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CHD8Q9HCK8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.05■■□□□ 1.12
CHD8Q9HCK8 AL358852.1-201ENST00000623174 1268 ntBASIC22.05■■□□□ 1.12
CHD8Q9HCK8 AC136469.2-201ENST00000623944 1028 ntBASIC22.05■■□□□ 1.12
CHD8Q9HCK8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CHD8Q9HCK8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.05■■□□□ 1.12
CHD8Q9HCK8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.05■■□□□ 1.12
CHD8Q9HCK8 AC026185.1-201ENST00000445748 174 ntBASIC22.05■■□□□ 1.12
CHD8Q9HCK8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.05■■□□□ 1.12
CHD8Q9HCK8 TERF1P2-201ENST00000583350 1212 ntBASIC22.05■■□□□ 1.12
CHD8Q9HCK8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.05■■□□□ 1.12
CHD8Q9HCK8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHD8Q9HCK8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHD8Q9HCK8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.03■■□□□ 1.12
CHD8Q9HCK8 CCDC92B-201ENST00000575506 885 ntBASIC22.03■■□□□ 1.12
CHD8Q9HCK8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHD8Q9HCK8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.03■■□□□ 1.12
CHD8Q9HCK8 AC005703.6-201ENST00000623265 1329 ntBASIC22.03■■□□□ 1.12
CHD8Q9HCK8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHD8Q9HCK8 CD99P1-205ENST00000527459 561 ntBASIC22.03■■□□□ 1.12
CHD8Q9HCK8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHD8Q9HCK8 NTF6G-201ENST00000591094 616 ntBASIC22.03■■□□□ 1.12
CHD8Q9HCK8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHD8Q9HCK8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHD8Q9HCK8 AL355802.2-201ENST00000402069 882 ntBASIC22.02■■□□□ 1.12
CHD8Q9HCK8 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.02■■□□□ 1.12
CHD8Q9HCK8 AC008687.6-201ENST00000596318 630 ntBASIC22.02■■□□□ 1.12
CHD8Q9HCK8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHD8Q9HCK8 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.02■■□□□ 1.12
CHD8Q9HCK8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms