Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
KCNF1Q9H3M0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
KCNF1Q9H3M0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
KCNF1Q9H3M0 LINC00526-201ENST00000581067 1875 ntBASIC25.46■■□□□ 1.67
KCNF1Q9H3M0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
KCNF1Q9H3M0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
KCNF1Q9H3M0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
KCNF1Q9H3M0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
KCNF1Q9H3M0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.45■■□□□ 1.67
KCNF1Q9H3M0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
KCNF1Q9H3M0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
KCNF1Q9H3M0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
KCNF1Q9H3M0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
KCNF1Q9H3M0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
KCNF1Q9H3M0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.66
KCNF1Q9H3M0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
KCNF1Q9H3M0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
KCNF1Q9H3M0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.45■■□□□ 1.66
KCNF1Q9H3M0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
KCNF1Q9H3M0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC25.45■■□□□ 1.66
KCNF1Q9H3M0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.45■■□□□ 1.66
KCNF1Q9H3M0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
KCNF1Q9H3M0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
KCNF1Q9H3M0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC25.44■■□□□ 1.66
KCNF1Q9H3M0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
KCNF1Q9H3M0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
KCNF1Q9H3M0 AC007375.3-201ENST00000600936 2314 ntBASIC25.44■■□□□ 1.66
KCNF1Q9H3M0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
KCNF1Q9H3M0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC25.44■■□□□ 1.66
KCNF1Q9H3M0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
KCNF1Q9H3M0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
KCNF1Q9H3M0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
KCNF1Q9H3M0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
KCNF1Q9H3M0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
KCNF1Q9H3M0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
KCNF1Q9H3M0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
KCNF1Q9H3M0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
KCNF1Q9H3M0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
KCNF1Q9H3M0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC25.43■■□□□ 1.66
KCNF1Q9H3M0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
KCNF1Q9H3M0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
KCNF1Q9H3M0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
KCNF1Q9H3M0 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.42■■□□□ 1.66
KCNF1Q9H3M0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
KCNF1Q9H3M0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
KCNF1Q9H3M0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.42■■□□□ 1.66
KCNF1Q9H3M0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
KCNF1Q9H3M0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
KCNF1Q9H3M0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
KCNF1Q9H3M0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
KCNF1Q9H3M0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
KCNF1Q9H3M0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC25.41■■□□□ 1.66
KCNF1Q9H3M0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
KCNF1Q9H3M0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC25.41■■□□□ 1.66
KCNF1Q9H3M0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
KCNF1Q9H3M0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
KCNF1Q9H3M0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.41■■□□□ 1.66
KCNF1Q9H3M0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.4■■□□□ 1.66
KCNF1Q9H3M0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
KCNF1Q9H3M0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
KCNF1Q9H3M0 AC008813.1-201ENST00000536597 885 ntBASIC25.4■■□□□ 1.66
KCNF1Q9H3M0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.4■■□□□ 1.66
KCNF1Q9H3M0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
KCNF1Q9H3M0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
KCNF1Q9H3M0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
KCNF1Q9H3M0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
KCNF1Q9H3M0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
KCNF1Q9H3M0 ANOS2P-203ENST00000472227 1816 ntBASIC25.4■■□□□ 1.66
KCNF1Q9H3M0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.39■■□□□ 1.66
KCNF1Q9H3M0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.39■■□□□ 1.66
KCNF1Q9H3M0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.39■■□□□ 1.66
KCNF1Q9H3M0 GUSBP5-202ENST00000510805 1989 ntBASIC25.39■■□□□ 1.66
KCNF1Q9H3M0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.39■■□□□ 1.66
KCNF1Q9H3M0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
KCNF1Q9H3M0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
KCNF1Q9H3M0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
KCNF1Q9H3M0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
KCNF1Q9H3M0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC25.39■■□□□ 1.65
KCNF1Q9H3M0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.39■■□□□ 1.65
KCNF1Q9H3M0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.38■■□□□ 1.65
KCNF1Q9H3M0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
KCNF1Q9H3M0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KCNF1Q9H3M0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KCNF1Q9H3M0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
KCNF1Q9H3M0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
KCNF1Q9H3M0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.38■■□□□ 1.65
KCNF1Q9H3M0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KCNF1Q9H3M0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KCNF1Q9H3M0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KCNF1Q9H3M0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
KCNF1Q9H3M0 DUSP8P3-201ENST00000399571 1760 ntBASIC25.37■■□□□ 1.65
KCNF1Q9H3M0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KCNF1Q9H3M0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.37■■□□□ 1.65
KCNF1Q9H3M0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KCNF1Q9H3M0 AP006261.1-201ENST00000584783 668 ntBASIC25.37■■□□□ 1.65
KCNF1Q9H3M0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
KCNF1Q9H3M0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
KCNF1Q9H3M0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC25.36■■□□□ 1.65
KCNF1Q9H3M0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.36■■□□□ 1.65
KCNF1Q9H3M0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms