Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF38Q9H0F5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF38Q9H0F5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF38Q9H0F5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF38Q9H0F5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.19■■□□□ 1.46
RNF38Q9H0F5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.19■■□□□ 1.46
RNF38Q9H0F5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF38Q9H0F5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF38Q9H0F5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.18■■□□□ 1.46
RNF38Q9H0F5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RNF38Q9H0F5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RNF38Q9H0F5 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.18■■□□□ 1.46
RNF38Q9H0F5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF38Q9H0F5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.18■■□□□ 1.46
RNF38Q9H0F5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
RNF38Q9H0F5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.18■■□□□ 1.46
RNF38Q9H0F5 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF38Q9H0F5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
RNF38Q9H0F5 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RNF38Q9H0F5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF38Q9H0F5 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
RNF38Q9H0F5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF38Q9H0F5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF38Q9H0F5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RNF38Q9H0F5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.17■■□□□ 1.46
RNF38Q9H0F5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.17■■□□□ 1.46
RNF38Q9H0F5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.17■■□□□ 1.46
RNF38Q9H0F5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RNF38Q9H0F5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.17■■□□□ 1.46
RNF38Q9H0F5 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF38Q9H0F5 AC135731.1-201ENST00000569415 2548 ntBASIC24.16■■□□□ 1.46
RNF38Q9H0F5 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF38Q9H0F5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF38Q9H0F5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.16■■□□□ 1.46
RNF38Q9H0F5 MIR6722-201ENST00000617286 78 ntBASIC24.16■■□□□ 1.46
RNF38Q9H0F5 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF38Q9H0F5 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF38Q9H0F5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
RNF38Q9H0F5 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF38Q9H0F5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.15■■□□□ 1.46
RNF38Q9H0F5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
RNF38Q9H0F5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.15■■□□□ 1.46
RNF38Q9H0F5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.15■■□□□ 1.46
RNF38Q9H0F5 AL356740.2-201ENST00000601559 647 ntBASIC24.15■■□□□ 1.46
RNF38Q9H0F5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
RNF38Q9H0F5 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF38Q9H0F5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
RNF38Q9H0F5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.14■■□□□ 1.46
RNF38Q9H0F5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.14■■□□□ 1.45
RNF38Q9H0F5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RNF38Q9H0F5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.14■■□□□ 1.45
RNF38Q9H0F5 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.14■■□□□ 1.45
RNF38Q9H0F5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RNF38Q9H0F5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.13■■□□□ 1.45
RNF38Q9H0F5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.13■■□□□ 1.45
RNF38Q9H0F5 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
RNF38Q9H0F5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF38Q9H0F5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.13■■□□□ 1.45
RNF38Q9H0F5 MIR6089-201ENST00000616698 64 ntBASIC24.13■■□□□ 1.45
RNF38Q9H0F5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.13■■□□□ 1.45
RNF38Q9H0F5 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.13■■□□□ 1.45
RNF38Q9H0F5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.13■■□□□ 1.45
RNF38Q9H0F5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.12■■□□□ 1.45
RNF38Q9H0F5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RNF38Q9H0F5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF38Q9H0F5 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.12■■□□□ 1.45
RNF38Q9H0F5 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF38Q9H0F5 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.12■■□□□ 1.45
RNF38Q9H0F5 AC004448.1-201ENST00000458332 883 ntBASIC24.12■■□□□ 1.45
RNF38Q9H0F5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.12■■□□□ 1.45
RNF38Q9H0F5 MIR4466-201ENST00000606121 54 ntBASIC24.12■■□□□ 1.45
RNF38Q9H0F5 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF38Q9H0F5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.11■■□□□ 1.45
RNF38Q9H0F5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.11■■□□□ 1.45
RNF38Q9H0F5 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.11■■□□□ 1.45
RNF38Q9H0F5 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF38Q9H0F5 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF38Q9H0F5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF38Q9H0F5 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF38Q9H0F5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF38Q9H0F5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF38Q9H0F5 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.1■■□□□ 1.45
RNF38Q9H0F5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF38Q9H0F5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.1■■□□□ 1.45
RNF38Q9H0F5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF38Q9H0F5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RNF38Q9H0F5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.09■■□□□ 1.45
RNF38Q9H0F5 AL136116.3-201ENST00000402907 1138 ntBASIC24.09■■□□□ 1.45
RNF38Q9H0F5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.09■■□□□ 1.45
RNF38Q9H0F5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RNF38Q9H0F5 AL512631.2-201ENST00000604634 923 ntBASIC24.09■■□□□ 1.45
RNF38Q9H0F5 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.09■■□□□ 1.45
RNF38Q9H0F5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.09■■□□□ 1.45
RNF38Q9H0F5 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.09■■□□□ 1.45
RNF38Q9H0F5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
RNF38Q9H0F5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF38Q9H0F5 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RNF38Q9H0F5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RNF38Q9H0F5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RNF38Q9H0F5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms