Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSBP3Q9BWW4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSBP3Q9BWW4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSBP3Q9BWW4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.32■□□□□ 0.68
SSBP3Q9BWW4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSBP3Q9BWW4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSBP3Q9BWW4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.31■□□□□ 0.68
SSBP3Q9BWW4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SSBP3Q9BWW4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.31■□□□□ 0.68
SSBP3Q9BWW4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.31■□□□□ 0.68
SSBP3Q9BWW4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSBP3Q9BWW4 MTDHP2-201ENST00000601468 714 ntBASIC19.31■□□□□ 0.68
SSBP3Q9BWW4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.31■□□□□ 0.68
SSBP3Q9BWW4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SSBP3Q9BWW4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.3■□□□□ 0.68
SSBP3Q9BWW4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SSBP3Q9BWW4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSBP3Q9BWW4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSBP3Q9BWW4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.3■□□□□ 0.68
SSBP3Q9BWW4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSBP3Q9BWW4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.3■□□□□ 0.68
SSBP3Q9BWW4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.3■□□□□ 0.68
SSBP3Q9BWW4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.3■□□□□ 0.68
SSBP3Q9BWW4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSBP3Q9BWW4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSBP3Q9BWW4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SSBP3Q9BWW4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.29■□□□□ 0.68
SSBP3Q9BWW4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.29■□□□□ 0.68
SSBP3Q9BWW4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSBP3Q9BWW4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.28■□□□□ 0.68
SSBP3Q9BWW4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSBP3Q9BWW4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSBP3Q9BWW4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSBP3Q9BWW4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SSBP3Q9BWW4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
SSBP3Q9BWW4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSBP3Q9BWW4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSBP3Q9BWW4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSBP3Q9BWW4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.28■□□□□ 0.68
SSBP3Q9BWW4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.28■□□□□ 0.68
SSBP3Q9BWW4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSBP3Q9BWW4 AC010997.5-201ENST00000609182 354 ntBASIC19.28■□□□□ 0.68
SSBP3Q9BWW4 MIR6089-201ENST00000616698 64 ntBASIC19.28■□□□□ 0.68
SSBP3Q9BWW4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSBP3Q9BWW4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.28■□□□□ 0.68
SSBP3Q9BWW4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSBP3Q9BWW4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSBP3Q9BWW4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSBP3Q9BWW4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSBP3Q9BWW4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SSBP3Q9BWW4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSBP3Q9BWW4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
SSBP3Q9BWW4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SSBP3Q9BWW4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.27■□□□□ 0.68
SSBP3Q9BWW4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SSBP3Q9BWW4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSBP3Q9BWW4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SSBP3Q9BWW4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SSBP3Q9BWW4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSBP3Q9BWW4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSBP3Q9BWW4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.26■□□□□ 0.67
SSBP3Q9BWW4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.26■□□□□ 0.67
SSBP3Q9BWW4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.26■□□□□ 0.67
SSBP3Q9BWW4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.26■□□□□ 0.67
SSBP3Q9BWW4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.26■□□□□ 0.67
SSBP3Q9BWW4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSBP3Q9BWW4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSBP3Q9BWW4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSBP3Q9BWW4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSBP3Q9BWW4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSBP3Q9BWW4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSBP3Q9BWW4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSBP3Q9BWW4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSBP3Q9BWW4 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.25■□□□□ 0.67
SSBP3Q9BWW4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.25■□□□□ 0.67
SSBP3Q9BWW4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.25■□□□□ 0.67
SSBP3Q9BWW4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSBP3Q9BWW4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSBP3Q9BWW4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.24■□□□□ 0.67
SSBP3Q9BWW4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SSBP3Q9BWW4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.24■□□□□ 0.67
SSBP3Q9BWW4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.24■□□□□ 0.67
SSBP3Q9BWW4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSBP3Q9BWW4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.24■□□□□ 0.67
SSBP3Q9BWW4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSBP3Q9BWW4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SSBP3Q9BWW4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSBP3Q9BWW4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSBP3Q9BWW4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSBP3Q9BWW4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSBP3Q9BWW4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.23■□□□□ 0.67
SSBP3Q9BWW4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.23■□□□□ 0.67
SSBP3Q9BWW4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSBP3Q9BWW4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSBP3Q9BWW4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSBP3Q9BWW4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
SSBP3Q9BWW4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSBP3Q9BWW4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SSBP3Q9BWW4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSBP3Q9BWW4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms