Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC31.56■■■□□ 2.64
ABCA3Q99758 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
ABCA3Q99758 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC31.56■■■□□ 2.64
ABCA3Q99758 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC31.56■■■□□ 2.64
ABCA3Q99758 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ABCA3Q99758 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
ABCA3Q99758 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
ABCA3Q99758 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
ABCA3Q99758 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
ABCA3Q99758 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
ABCA3Q99758 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC31.55■■■□□ 2.64
ABCA3Q99758 AC004448.1-201ENST00000458332 883 ntBASIC31.55■■■□□ 2.64
ABCA3Q99758 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
ABCA3Q99758 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
ABCA3Q99758 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ABCA3Q99758 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ABCA3Q99758 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ABCA3Q99758 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ABCA3Q99758 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
ABCA3Q99758 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.54■■■□□ 2.64
ABCA3Q99758 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC31.53■■■□□ 2.64
ABCA3Q99758 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC31.53■■■□□ 2.64
ABCA3Q99758 AC099791.1-201ENST00000416440 715 ntBASIC31.53■■■□□ 2.64
ABCA3Q99758 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC31.53■■■□□ 2.64
ABCA3Q99758 RARRES2P11-201ENST00000635158 484 ntBASIC31.53■■■□□ 2.64
ABCA3Q99758 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ABCA3Q99758 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.53■■■□□ 2.64
ABCA3Q99758 JTB-203ENST00000368589 1216 ntTSL 2 BASIC31.52■■■□□ 2.64
ABCA3Q99758 GLI3-203ENST00000437480 451 ntTSL 2 BASIC31.52■■■□□ 2.64
ABCA3Q99758 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
ABCA3Q99758 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC31.52■■■□□ 2.64
ABCA3Q99758 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
ABCA3Q99758 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
ABCA3Q99758 SYT6-210ENST00000641643 1587 ntBASIC31.5■■■□□ 2.63
ABCA3Q99758 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC31.5■■■□□ 2.63
ABCA3Q99758 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
ABCA3Q99758 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC31.49■■■□□ 2.63
ABCA3Q99758 KRT18P5-201ENST00000436075 1291 ntBASIC31.49■■■□□ 2.63
ABCA3Q99758 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ABCA3Q99758 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ABCA3Q99758 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ABCA3Q99758 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
ABCA3Q99758 AL031602.1-201ENST00000633169 911 ntBASIC31.49■■■□□ 2.63
ABCA3Q99758 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
ABCA3Q99758 AC005703.6-201ENST00000623265 1329 ntBASIC31.48■■■□□ 2.63
ABCA3Q99758 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC31.48■■■□□ 2.63
ABCA3Q99758 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
ABCA3Q99758 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ABCA3Q99758 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
ABCA3Q99758 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC31.47■■■□□ 2.63
ABCA3Q99758 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.47■■■□□ 2.63
ABCA3Q99758 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.47■■■□□ 2.63
ABCA3Q99758 AC096887.2-201ENST00000623443 1957 ntBASIC31.47■■■□□ 2.63
ABCA3Q99758 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ABCA3Q99758 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ABCA3Q99758 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC31.46■■■□□ 2.63
ABCA3Q99758 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ABCA3Q99758 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC31.46■■■□□ 2.63
ABCA3Q99758 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
ABCA3Q99758 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
ABCA3Q99758 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC31.46■■■□□ 2.63
ABCA3Q99758 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
ABCA3Q99758 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
ABCA3Q99758 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
ABCA3Q99758 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
ABCA3Q99758 IRS3P-201ENST00000223076 1006 ntBASIC31.45■■■□□ 2.63
ABCA3Q99758 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC31.45■■■□□ 2.63
ABCA3Q99758 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC31.45■■■□□ 2.63
ABCA3Q99758 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC31.45■■■□□ 2.63
ABCA3Q99758 AC092437.1-201ENST00000624794 1048 ntBASIC31.45■■■□□ 2.63
ABCA3Q99758 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
ABCA3Q99758 AC131274.2-201ENST00000580697 1507 ntBASIC31.45■■■□□ 2.62
ABCA3Q99758 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
ABCA3Q99758 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
ABCA3Q99758 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ABCA3Q99758 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC31.44■■■□□ 2.62
ABCA3Q99758 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
ABCA3Q99758 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.44■■■□□ 2.62
ABCA3Q99758 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC31.44■■■□□ 2.62
ABCA3Q99758 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
ABCA3Q99758 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
ABCA3Q99758 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ABCA3Q99758 AC034268.1-201ENST00000441047 882 ntBASIC31.43■■■□□ 2.62
ABCA3Q99758 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
ABCA3Q99758 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ABCA3Q99758 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
ABCA3Q99758 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ABCA3Q99758 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
ABCA3Q99758 ASB1-202ENST00000409297 878 ntTSL 5 BASIC31.41■■■□□ 2.62
ABCA3Q99758 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
ABCA3Q99758 SP2-202ENST00000613139 908 ntTSL 5 BASIC31.41■■■□□ 2.62
ABCA3Q99758 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ABCA3Q99758 AC008764.7-201ENST00000593779 1081 ntBASIC31.41■■■□□ 2.62
ABCA3Q99758 AL138724.1-201ENST00000606771 1088 ntBASIC31.41■■■□□ 2.62
ABCA3Q99758 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
ABCA3Q99758 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
ABCA3Q99758 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
ABCA3Q99758 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
ABCA3Q99758 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC31.4■■■□□ 2.62
ABCA3Q99758 AC099791.2-201ENST00000605725 427 ntBASIC31.4■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms