Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.07■□□□□ 0.48
TRGV9Q99603 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRGV9Q99603 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRGV9Q99603 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRGV9Q99603 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRGV9Q99603 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRGV9Q99603 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRGV9Q99603 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRGV9Q99603 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRGV9Q99603 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.06■□□□□ 0.48
TRGV9Q99603 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRGV9Q99603 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRGV9Q99603 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRGV9Q99603 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRGV9Q99603 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRGV9Q99603 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRGV9Q99603 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRGV9Q99603 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRGV9Q99603 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRGV9Q99603 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRGV9Q99603 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRGV9Q99603 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRGV9Q99603 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.06■□□□□ 0.48
TRGV9Q99603 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.06■□□□□ 0.48
TRGV9Q99603 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRGV9Q99603 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.06■□□□□ 0.48
TRGV9Q99603 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRGV9Q99603 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRGV9Q99603 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRGV9Q99603 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRGV9Q99603 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TRGV9Q99603 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRGV9Q99603 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRGV9Q99603 MIR4449-201ENST00000578365 66 ntBASIC18.05■□□□□ 0.48
TRGV9Q99603 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRGV9Q99603 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.05■□□□□ 0.48
TRGV9Q99603 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.05■□□□□ 0.48
TRGV9Q99603 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRGV9Q99603 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRGV9Q99603 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRGV9Q99603 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRGV9Q99603 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRGV9Q99603 AC009831.1-201ENST00000580420 1582 ntBASIC18.04■□□□□ 0.48
TRGV9Q99603 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.04■□□□□ 0.48
TRGV9Q99603 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRGV9Q99603 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.04■□□□□ 0.48
TRGV9Q99603 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRGV9Q99603 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRGV9Q99603 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRGV9Q99603 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRGV9Q99603 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.04■□□□□ 0.48
TRGV9Q99603 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRGV9Q99603 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.04■□□□□ 0.48
TRGV9Q99603 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.04■□□□□ 0.48
TRGV9Q99603 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRGV9Q99603 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRGV9Q99603 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRGV9Q99603 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRGV9Q99603 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRGV9Q99603 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRGV9Q99603 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRGV9Q99603 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRGV9Q99603 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.03■□□□□ 0.48
TRGV9Q99603 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
TRGV9Q99603 AC133552.2-201ENST00000619106 1032 ntBASIC18.03■□□□□ 0.48
TRGV9Q99603 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRGV9Q99603 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRGV9Q99603 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.02■□□□□ 0.48
TRGV9Q99603 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TRGV9Q99603 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRGV9Q99603 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
TRGV9Q99603 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRGV9Q99603 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRGV9Q99603 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRGV9Q99603 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TRGV9Q99603 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.02■□□□□ 0.48
TRGV9Q99603 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TRGV9Q99603 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRGV9Q99603 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRGV9Q99603 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRGV9Q99603 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRGV9Q99603 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRGV9Q99603 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.01■□□□□ 0.47
TRGV9Q99603 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRGV9Q99603 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.01■□□□□ 0.47
TRGV9Q99603 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.01■□□□□ 0.47
TRGV9Q99603 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRGV9Q99603 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.01■□□□□ 0.47
TRGV9Q99603 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRGV9Q99603 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRGV9Q99603 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRGV9Q99603 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
TRGV9Q99603 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRGV9Q99603 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18■□□□□ 0.47
TRGV9Q99603 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRGV9Q99603 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRGV9Q99603 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRGV9Q99603 RPS2P7-201ENST00000447334 885 ntBASIC18■□□□□ 0.47
TRGV9Q99603 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18■□□□□ 0.47
TRGV9Q99603 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms