Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC131212.1-201ENST00000613771 668 ntBASIC24.19■■□□□ 1.46
CDK5RAP1Q96SZ6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDK5RAP1Q96SZ6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDK5RAP1Q96SZ6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
CDK5RAP1Q96SZ6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.18■■□□□ 1.46
CDK5RAP1Q96SZ6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDK5RAP1Q96SZ6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CDK5RAP1Q96SZ6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDK5RAP1Q96SZ6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CDK5RAP1Q96SZ6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CDK5RAP1Q96SZ6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDK5RAP1Q96SZ6 SNX5-217ENST00000606557 1087 ntBASIC24.18■■□□□ 1.46
CDK5RAP1Q96SZ6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CDK5RAP1Q96SZ6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CDK5RAP1Q96SZ6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.17■■□□□ 1.46
CDK5RAP1Q96SZ6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDK5RAP1Q96SZ6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDK5RAP1Q96SZ6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDK5RAP1Q96SZ6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDK5RAP1Q96SZ6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.16■■□□□ 1.46
CDK5RAP1Q96SZ6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.16■■□□□ 1.46
CDK5RAP1Q96SZ6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.16■■□□□ 1.46
CDK5RAP1Q96SZ6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDK5RAP1Q96SZ6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.16■■□□□ 1.46
CDK5RAP1Q96SZ6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.16■■□□□ 1.46
CDK5RAP1Q96SZ6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.16■■□□□ 1.46
CDK5RAP1Q96SZ6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CDK5RAP1Q96SZ6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CDK5RAP1Q96SZ6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDK5RAP1Q96SZ6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDK5RAP1Q96SZ6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDK5RAP1Q96SZ6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDK5RAP1Q96SZ6 MIR6722-201ENST00000617286 78 ntBASIC24.15■■□□□ 1.46
CDK5RAP1Q96SZ6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.15■■□□□ 1.46
CDK5RAP1Q96SZ6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.15■■□□□ 1.46
CDK5RAP1Q96SZ6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.15■■□□□ 1.46
CDK5RAP1Q96SZ6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDK5RAP1Q96SZ6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.14■■□□□ 1.46
CDK5RAP1Q96SZ6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.14■■□□□ 1.46
CDK5RAP1Q96SZ6 MIR6724-1-201ENST00000616420 92 ntBASIC24.14■■□□□ 1.45
CDK5RAP1Q96SZ6 MIR6724-2-201ENST00000616483 92 ntBASIC24.14■■□□□ 1.45
CDK5RAP1Q96SZ6 MIR6724-4-201ENST00000617390 92 ntBASIC24.14■■□□□ 1.45
CDK5RAP1Q96SZ6 MIR6724-3-201ENST00000622482 92 ntBASIC24.14■■□□□ 1.45
CDK5RAP1Q96SZ6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDK5RAP1Q96SZ6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
CDK5RAP1Q96SZ6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.13■■□□□ 1.45
CDK5RAP1Q96SZ6 AC004448.1-201ENST00000458332 883 ntBASIC24.13■■□□□ 1.45
CDK5RAP1Q96SZ6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.13■■□□□ 1.45
CDK5RAP1Q96SZ6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDK5RAP1Q96SZ6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
CDK5RAP1Q96SZ6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.13■■□□□ 1.45
CDK5RAP1Q96SZ6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDK5RAP1Q96SZ6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDK5RAP1Q96SZ6 AP003733.4-201ENST00000623785 1697 ntBASIC24.12■■□□□ 1.45
CDK5RAP1Q96SZ6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDK5RAP1Q96SZ6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CDK5RAP1Q96SZ6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.12■■□□□ 1.45
CDK5RAP1Q96SZ6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.12■■□□□ 1.45
CDK5RAP1Q96SZ6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
CDK5RAP1Q96SZ6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CDK5RAP1Q96SZ6 AC022211.4-201ENST00000625094 2161 ntBASIC24.11■■□□□ 1.45
CDK5RAP1Q96SZ6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.11■■□□□ 1.45
CDK5RAP1Q96SZ6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDK5RAP1Q96SZ6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CDK5RAP1Q96SZ6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.11■■□□□ 1.45
CDK5RAP1Q96SZ6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.11■■□□□ 1.45
CDK5RAP1Q96SZ6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDK5RAP1Q96SZ6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDK5RAP1Q96SZ6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.11■■□□□ 1.45
CDK5RAP1Q96SZ6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
CDK5RAP1Q96SZ6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CDK5RAP1Q96SZ6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CDK5RAP1Q96SZ6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.1■■□□□ 1.45
CDK5RAP1Q96SZ6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDK5RAP1Q96SZ6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.1■■□□□ 1.45
CDK5RAP1Q96SZ6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
CDK5RAP1Q96SZ6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDK5RAP1Q96SZ6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDK5RAP1Q96SZ6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.1■■□□□ 1.45
CDK5RAP1Q96SZ6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDK5RAP1Q96SZ6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDK5RAP1Q96SZ6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.09■■□□□ 1.45
CDK5RAP1Q96SZ6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
CDK5RAP1Q96SZ6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CDK5RAP1Q96SZ6 AL022069.1-201ENST00000568025 1636 ntBASIC24.09■■□□□ 1.45
CDK5RAP1Q96SZ6 AL161729.1-201ENST00000604104 1402 ntBASIC24.09■■□□□ 1.45
CDK5RAP1Q96SZ6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.08■■□□□ 1.45
CDK5RAP1Q96SZ6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.08■■□□□ 1.45
CDK5RAP1Q96SZ6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDK5RAP1Q96SZ6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDK5RAP1Q96SZ6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.08■■□□□ 1.45
CDK5RAP1Q96SZ6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.08■■□□□ 1.45
CDK5RAP1Q96SZ6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CDK5RAP1Q96SZ6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.08■■□□□ 1.44
CDK5RAP1Q96SZ6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.44
CDK5RAP1Q96SZ6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CDK5RAP1Q96SZ6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDK5RAP1Q96SZ6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CDK5RAP1Q96SZ6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.07■■□□□ 1.44
CDK5RAP1Q96SZ6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms