Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCC1Q96S66 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCC1Q96S66 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCC1Q96S66 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCC1Q96S66 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCC1Q96S66 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCC1Q96S66 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCC1Q96S66 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCC1Q96S66 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCC1Q96S66 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCC1Q96S66 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CLCC1Q96S66 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCC1Q96S66 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLCC1Q96S66 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.33■□□□□ 0.69
CLCC1Q96S66 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.33■□□□□ 0.69
CLCC1Q96S66 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLCC1Q96S66 ECEL1P2-201ENST00000461596 1295 ntBASIC19.33■□□□□ 0.68
CLCC1Q96S66 AL139125.2-201ENST00000623134 1869 ntBASIC19.33■□□□□ 0.68
CLCC1Q96S66 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCC1Q96S66 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.32■□□□□ 0.68
CLCC1Q96S66 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCC1Q96S66 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLCC1Q96S66 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.32■□□□□ 0.68
CLCC1Q96S66 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCC1Q96S66 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCC1Q96S66 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCC1Q96S66 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CLCC1Q96S66 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.32■□□□□ 0.68
CLCC1Q96S66 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCC1Q96S66 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.32■□□□□ 0.68
CLCC1Q96S66 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCC1Q96S66 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCC1Q96S66 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCC1Q96S66 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCC1Q96S66 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCC1Q96S66 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCC1Q96S66 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CLCC1Q96S66 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.31■□□□□ 0.68
CLCC1Q96S66 AC025884.2-201ENST00000553429 711 ntBASIC19.31■□□□□ 0.68
CLCC1Q96S66 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.31■□□□□ 0.68
CLCC1Q96S66 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCC1Q96S66 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CLCC1Q96S66 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CLCC1Q96S66 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCC1Q96S66 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCC1Q96S66 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CLCC1Q96S66 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLCC1Q96S66 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.3■□□□□ 0.68
CLCC1Q96S66 MIR3960-201ENST00000583311 91 ntBASIC19.3■□□□□ 0.68
CLCC1Q96S66 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.3■□□□□ 0.68
CLCC1Q96S66 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CLCC1Q96S66 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCC1Q96S66 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCC1Q96S66 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCC1Q96S66 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLCC1Q96S66 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CLCC1Q96S66 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCC1Q96S66 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCC1Q96S66 AC138932.3-201ENST00000567634 1902 ntBASIC19.29■□□□□ 0.68
CLCC1Q96S66 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.29■□□□□ 0.68
CLCC1Q96S66 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCC1Q96S66 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCC1Q96S66 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCC1Q96S66 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.29■□□□□ 0.68
CLCC1Q96S66 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
CLCC1Q96S66 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.29■□□□□ 0.68
CLCC1Q96S66 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCC1Q96S66 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCC1Q96S66 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCC1Q96S66 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCC1Q96S66 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCC1Q96S66 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCC1Q96S66 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCC1Q96S66 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.28■□□□□ 0.68
CLCC1Q96S66 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCC1Q96S66 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCC1Q96S66 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCC1Q96S66 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CLCC1Q96S66 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLCC1Q96S66 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCC1Q96S66 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CLCC1Q96S66 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.27■□□□□ 0.68
CLCC1Q96S66 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLCC1Q96S66 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.27■□□□□ 0.68
CLCC1Q96S66 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CLCC1Q96S66 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCC1Q96S66 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCC1Q96S66 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCC1Q96S66 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCC1Q96S66 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.26■□□□□ 0.67
CLCC1Q96S66 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.26■□□□□ 0.67
CLCC1Q96S66 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.26■□□□□ 0.67
CLCC1Q96S66 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCC1Q96S66 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCC1Q96S66 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCC1Q96S66 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCC1Q96S66 AC096887.2-201ENST00000623443 1957 ntBASIC19.25■□□□□ 0.67
CLCC1Q96S66 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.25■□□□□ 0.67
CLCC1Q96S66 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCC1Q96S66 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms