Protein–RNA interactions for Protein: Q96EL3

MRPL53, 39S ribosomal protein L53, mitochondrial, humanhuman

Known RBP Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL53Q96EL3 RPS2P7-201ENST00000447334 885 ntBASIC17.42■□□□□ 0.38
MRPL53Q96EL3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.42■□□□□ 0.38
MRPL53Q96EL3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.42■□□□□ 0.38
MRPL53Q96EL3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPL53Q96EL3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MRPL53Q96EL3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.42■□□□□ 0.38
MRPL53Q96EL3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPL53Q96EL3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MRPL53Q96EL3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.42■□□□□ 0.38
MRPL53Q96EL3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPL53Q96EL3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL53Q96EL3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL53Q96EL3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
MRPL53Q96EL3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
MRPL53Q96EL3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL53Q96EL3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL53Q96EL3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
MRPL53Q96EL3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.41■□□□□ 0.38
MRPL53Q96EL3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
MRPL53Q96EL3 AC018755.3-202ENST00000596210 929 ntBASIC17.41■□□□□ 0.38
MRPL53Q96EL3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MRPL53Q96EL3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL53Q96EL3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.41■□□□□ 0.38
MRPL53Q96EL3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.41■□□□□ 0.38
MRPL53Q96EL3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL53Q96EL3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.41■□□□□ 0.38
MRPL53Q96EL3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.41■□□□□ 0.38
MRPL53Q96EL3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MRPL53Q96EL3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.4■□□□□ 0.38
MRPL53Q96EL3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MRPL53Q96EL3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MRPL53Q96EL3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MRPL53Q96EL3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
MRPL53Q96EL3 AL592295.1-201ENST00000400984 884 ntBASIC17.4■□□□□ 0.38
MRPL53Q96EL3 AC090877.2-201ENST00000558441 1738 ntBASIC17.4■□□□□ 0.38
MRPL53Q96EL3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MRPL53Q96EL3 RNF126P1-201ENST00000567452 1320 ntBASIC17.4■□□□□ 0.38
MRPL53Q96EL3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MRPL53Q96EL3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.4■□□□□ 0.38
MRPL53Q96EL3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
MRPL53Q96EL3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
MRPL53Q96EL3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MRPL53Q96EL3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MRPL53Q96EL3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MRPL53Q96EL3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.39■□□□□ 0.37
MRPL53Q96EL3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MRPL53Q96EL3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
MRPL53Q96EL3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
MRPL53Q96EL3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
MRPL53Q96EL3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MRPL53Q96EL3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL53Q96EL3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL53Q96EL3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL53Q96EL3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.38■□□□□ 0.37
MRPL53Q96EL3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL53Q96EL3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.38■□□□□ 0.37
MRPL53Q96EL3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL53Q96EL3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.38■□□□□ 0.37
MRPL53Q96EL3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL53Q96EL3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.38■□□□□ 0.37
MRPL53Q96EL3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL53Q96EL3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL53Q96EL3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL53Q96EL3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL53Q96EL3 AC068473.5-201ENST00000616428 2072 ntBASIC17.38■□□□□ 0.37
MRPL53Q96EL3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MRPL53Q96EL3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.37■□□□□ 0.37
MRPL53Q96EL3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MRPL53Q96EL3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MRPL53Q96EL3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
MRPL53Q96EL3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MRPL53Q96EL3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.37■□□□□ 0.37
MRPL53Q96EL3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MRPL53Q96EL3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MRPL53Q96EL3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MRPL53Q96EL3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MRPL53Q96EL3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPL53Q96EL3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.36■□□□□ 0.37
MRPL53Q96EL3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPL53Q96EL3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPL53Q96EL3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.36■□□□□ 0.37
MRPL53Q96EL3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
MRPL53Q96EL3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.36■□□□□ 0.37
MRPL53Q96EL3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.36■□□□□ 0.37
MRPL53Q96EL3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPL53Q96EL3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.36■□□□□ 0.37
MRPL53Q96EL3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MRPL53Q96EL3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPL53Q96EL3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPL53Q96EL3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.35■□□□□ 0.37
MRPL53Q96EL3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MRPL53Q96EL3 AC087393.1-201ENST00000582896 145 ntBASIC17.35■□□□□ 0.37
MRPL53Q96EL3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPL53Q96EL3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.35■□□□□ 0.37
MRPL53Q96EL3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.35■□□□□ 0.37
MRPL53Q96EL3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.35■□□□□ 0.37
MRPL53Q96EL3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.35■□□□□ 0.37
MRPL53Q96EL3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPL53Q96EL3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPL53Q96EL3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms