Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ECHDC3Q96DC8 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.37■■□□□ 1.33
ECHDC3Q96DC8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.37■■□□□ 1.33
ECHDC3Q96DC8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.37■■□□□ 1.33
ECHDC3Q96DC8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.37■■□□□ 1.33
ECHDC3Q96DC8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ECHDC3Q96DC8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ECHDC3Q96DC8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ECHDC3Q96DC8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ECHDC3Q96DC8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ECHDC3Q96DC8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ECHDC3Q96DC8 AC138932.3-201ENST00000567634 1902 ntBASIC23.37■■□□□ 1.33
ECHDC3Q96DC8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ECHDC3Q96DC8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ECHDC3Q96DC8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ECHDC3Q96DC8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
ECHDC3Q96DC8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ECHDC3Q96DC8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ECHDC3Q96DC8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.35■■□□□ 1.33
ECHDC3Q96DC8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
ECHDC3Q96DC8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.35■■□□□ 1.33
ECHDC3Q96DC8 AC092028.1-203ENST00000608262 953 ntBASIC23.35■■□□□ 1.33
ECHDC3Q96DC8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
ECHDC3Q96DC8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
ECHDC3Q96DC8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.35■■□□□ 1.33
ECHDC3Q96DC8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ECHDC3Q96DC8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ECHDC3Q96DC8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.34■■□□□ 1.33
ECHDC3Q96DC8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.34■■□□□ 1.33
ECHDC3Q96DC8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.34■■□□□ 1.33
ECHDC3Q96DC8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
ECHDC3Q96DC8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.34■■□□□ 1.33
ECHDC3Q96DC8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.34■■□□□ 1.33
ECHDC3Q96DC8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ECHDC3Q96DC8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.33■■□□□ 1.33
ECHDC3Q96DC8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ECHDC3Q96DC8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.33■■□□□ 1.33
ECHDC3Q96DC8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ECHDC3Q96DC8 HLA-L-211ENST00000482052 1765 ntBASIC23.32■■□□□ 1.32
ECHDC3Q96DC8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.31■■□□□ 1.32
ECHDC3Q96DC8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.31■■□□□ 1.32
ECHDC3Q96DC8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ECHDC3Q96DC8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ECHDC3Q96DC8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ECHDC3Q96DC8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.31■■□□□ 1.32
ECHDC3Q96DC8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.31■■□□□ 1.32
ECHDC3Q96DC8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.31■■□□□ 1.32
ECHDC3Q96DC8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ECHDC3Q96DC8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ECHDC3Q96DC8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ECHDC3Q96DC8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
ECHDC3Q96DC8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ECHDC3Q96DC8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
ECHDC3Q96DC8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ECHDC3Q96DC8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.3■■□□□ 1.32
ECHDC3Q96DC8 UNC93B8-201ENST00000511903 705 ntBASIC23.3■■□□□ 1.32
ECHDC3Q96DC8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
ECHDC3Q96DC8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ECHDC3Q96DC8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ECHDC3Q96DC8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.29■■□□□ 1.32
ECHDC3Q96DC8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ECHDC3Q96DC8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ECHDC3Q96DC8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
ECHDC3Q96DC8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.28■■□□□ 1.32
ECHDC3Q96DC8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.28■■□□□ 1.32
ECHDC3Q96DC8 SNX5-217ENST00000606557 1087 ntBASIC23.28■■□□□ 1.32
ECHDC3Q96DC8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.28■■□□□ 1.32
ECHDC3Q96DC8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ECHDC3Q96DC8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ECHDC3Q96DC8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
ECHDC3Q96DC8 AC131274.2-201ENST00000580697 1507 ntBASIC23.28■■□□□ 1.32
ECHDC3Q96DC8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.27■■□□□ 1.32
ECHDC3Q96DC8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ECHDC3Q96DC8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.27■■□□□ 1.32
ECHDC3Q96DC8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
ECHDC3Q96DC8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.27■■□□□ 1.32
ECHDC3Q96DC8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.27■■□□□ 1.32
ECHDC3Q96DC8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.27■■□□□ 1.32
ECHDC3Q96DC8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.27■■□□□ 1.32
ECHDC3Q96DC8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ECHDC3Q96DC8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ECHDC3Q96DC8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ECHDC3Q96DC8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ECHDC3Q96DC8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.26■■□□□ 1.31
ECHDC3Q96DC8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.26■■□□□ 1.31
ECHDC3Q96DC8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.26■■□□□ 1.31
ECHDC3Q96DC8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
ECHDC3Q96DC8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ECHDC3Q96DC8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
ECHDC3Q96DC8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
ECHDC3Q96DC8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.26■■□□□ 1.31
ECHDC3Q96DC8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ECHDC3Q96DC8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
ECHDC3Q96DC8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.26■■□□□ 1.31
ECHDC3Q96DC8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
ECHDC3Q96DC8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ECHDC3Q96DC8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ECHDC3Q96DC8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ECHDC3Q96DC8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
ECHDC3Q96DC8 AC004448.1-201ENST00000458332 883 ntBASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms