Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPS4Y2Q8TD47 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RPS4Y2Q8TD47 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RPS4Y2Q8TD47 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPS4Y2Q8TD47 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.36■□□□□ 0.85
RPS4Y2Q8TD47 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPS4Y2Q8TD47 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.36■□□□□ 0.85
RPS4Y2Q8TD47 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.36■□□□□ 0.85
RPS4Y2Q8TD47 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
RPS4Y2Q8TD47 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
RPS4Y2Q8TD47 AC093536.1-201ENST00000569153 554 ntBASIC20.36■□□□□ 0.85
RPS4Y2Q8TD47 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.36■□□□□ 0.85
RPS4Y2Q8TD47 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPS4Y2Q8TD47 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPS4Y2Q8TD47 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.35■□□□□ 0.85
RPS4Y2Q8TD47 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RPS4Y2Q8TD47 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.35■□□□□ 0.85
RPS4Y2Q8TD47 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPS4Y2Q8TD47 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPS4Y2Q8TD47 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPS4Y2Q8TD47 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPS4Y2Q8TD47 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPS4Y2Q8TD47 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPS4Y2Q8TD47 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPS4Y2Q8TD47 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.34■□□□□ 0.85
RPS4Y2Q8TD47 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RPS4Y2Q8TD47 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPS4Y2Q8TD47 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.34■□□□□ 0.85
RPS4Y2Q8TD47 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPS4Y2Q8TD47 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.33■□□□□ 0.85
RPS4Y2Q8TD47 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.33■□□□□ 0.85
RPS4Y2Q8TD47 KRT18P10-201ENST00000388836 1287 ntBASIC20.33■□□□□ 0.85
RPS4Y2Q8TD47 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RPS4Y2Q8TD47 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPS4Y2Q8TD47 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPS4Y2Q8TD47 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RPS4Y2Q8TD47 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.33■□□□□ 0.84
RPS4Y2Q8TD47 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPS4Y2Q8TD47 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPS4Y2Q8TD47 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPS4Y2Q8TD47 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RPS4Y2Q8TD47 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPS4Y2Q8TD47 RAP2CP1-202ENST00000605179 643 ntBASIC20.32■□□□□ 0.84
RPS4Y2Q8TD47 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPS4Y2Q8TD47 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPS4Y2Q8TD47 C9orf163-202ENST00000624034 2573 ntBASIC20.32■□□□□ 0.84
RPS4Y2Q8TD47 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPS4Y2Q8TD47 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RPS4Y2Q8TD47 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS4Y2Q8TD47 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS4Y2Q8TD47 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS4Y2Q8TD47 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS4Y2Q8TD47 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.31■□□□□ 0.84
RPS4Y2Q8TD47 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.31■□□□□ 0.84
RPS4Y2Q8TD47 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS4Y2Q8TD47 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.31■□□□□ 0.84
RPS4Y2Q8TD47 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPS4Y2Q8TD47 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS4Y2Q8TD47 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPS4Y2Q8TD47 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPS4Y2Q8TD47 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPS4Y2Q8TD47 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPS4Y2Q8TD47 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
RPS4Y2Q8TD47 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPS4Y2Q8TD47 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPS4Y2Q8TD47 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.3■□□□□ 0.84
RPS4Y2Q8TD47 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPS4Y2Q8TD47 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPS4Y2Q8TD47 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPS4Y2Q8TD47 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.3■□□□□ 0.84
RPS4Y2Q8TD47 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.3■□□□□ 0.84
RPS4Y2Q8TD47 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS4Y2Q8TD47 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS4Y2Q8TD47 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS4Y2Q8TD47 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPS4Y2Q8TD47 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RPS4Y2Q8TD47 AC007029.1-201ENST00000604183 313 ntBASIC20.29■□□□□ 0.84
RPS4Y2Q8TD47 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS4Y2Q8TD47 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.29■□□□□ 0.84
RPS4Y2Q8TD47 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RPS4Y2Q8TD47 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.29■□□□□ 0.84
RPS4Y2Q8TD47 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPS4Y2Q8TD47 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPS4Y2Q8TD47 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.28■□□□□ 0.84
RPS4Y2Q8TD47 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.28■□□□□ 0.84
RPS4Y2Q8TD47 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPS4Y2Q8TD47 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPS4Y2Q8TD47 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.27■□□□□ 0.84
RPS4Y2Q8TD47 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS4Y2Q8TD47 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS4Y2Q8TD47 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPS4Y2Q8TD47 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RPS4Y2Q8TD47 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS4Y2Q8TD47 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RPS4Y2Q8TD47 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS4Y2Q8TD47 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPS4Y2Q8TD47 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.27■□□□□ 0.84
RPS4Y2Q8TD47 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.27■□□□□ 0.84
RPS4Y2Q8TD47 AC026202.3-201ENST00000600805 1127 ntBASIC20.27■□□□□ 0.84
RPS4Y2Q8TD47 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms