Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.31■□□□□ 0.84
DNAAF1Q8NEP3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.31■□□□□ 0.84
DNAAF1Q8NEP3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DNAAF1Q8NEP3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DNAAF1Q8NEP3 MIR6089-201ENST00000616698 64 ntBASIC20.3■□□□□ 0.84
DNAAF1Q8NEP3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DNAAF1Q8NEP3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DNAAF1Q8NEP3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DNAAF1Q8NEP3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DNAAF1Q8NEP3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
DNAAF1Q8NEP3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DNAAF1Q8NEP3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DNAAF1Q8NEP3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DNAAF1Q8NEP3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DNAAF1Q8NEP3 KRT18P10-201ENST00000388836 1287 ntBASIC20.29■□□□□ 0.84
DNAAF1Q8NEP3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.29■□□□□ 0.84
DNAAF1Q8NEP3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.29■□□□□ 0.84
DNAAF1Q8NEP3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DNAAF1Q8NEP3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.28■□□□□ 0.84
DNAAF1Q8NEP3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DNAAF1Q8NEP3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
DNAAF1Q8NEP3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.28■□□□□ 0.84
DNAAF1Q8NEP3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DNAAF1Q8NEP3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DNAAF1Q8NEP3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.28■□□□□ 0.84
DNAAF1Q8NEP3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.28■□□□□ 0.84
DNAAF1Q8NEP3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DNAAF1Q8NEP3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DNAAF1Q8NEP3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DNAAF1Q8NEP3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.27■□□□□ 0.84
DNAAF1Q8NEP3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DNAAF1Q8NEP3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DNAAF1Q8NEP3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DNAAF1Q8NEP3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
DNAAF1Q8NEP3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DNAAF1Q8NEP3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
DNAAF1Q8NEP3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
DNAAF1Q8NEP3 HLA-L-211ENST00000482052 1765 ntBASIC20.26■□□□□ 0.83
DNAAF1Q8NEP3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
DNAAF1Q8NEP3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.26■□□□□ 0.83
DNAAF1Q8NEP3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
DNAAF1Q8NEP3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DNAAF1Q8NEP3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DNAAF1Q8NEP3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
DNAAF1Q8NEP3 GPX1-201ENST00000419349 1106 ntBASIC20.26■□□□□ 0.83
DNAAF1Q8NEP3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DNAAF1Q8NEP3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
DNAAF1Q8NEP3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
DNAAF1Q8NEP3 RAP2CP1-202ENST00000605179 643 ntBASIC20.26■□□□□ 0.83
DNAAF1Q8NEP3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DNAAF1Q8NEP3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DNAAF1Q8NEP3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.26■□□□□ 0.83
DNAAF1Q8NEP3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
DNAAF1Q8NEP3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DNAAF1Q8NEP3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.25■□□□□ 0.83
DNAAF1Q8NEP3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.25■□□□□ 0.83
DNAAF1Q8NEP3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DNAAF1Q8NEP3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DNAAF1Q8NEP3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
DNAAF1Q8NEP3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
DNAAF1Q8NEP3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DNAAF1Q8NEP3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DNAAF1Q8NEP3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DNAAF1Q8NEP3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DNAAF1Q8NEP3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DNAAF1Q8NEP3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.24■□□□□ 0.83
DNAAF1Q8NEP3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.24■□□□□ 0.83
DNAAF1Q8NEP3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.24■□□□□ 0.83
DNAAF1Q8NEP3 CLDN5-201ENST00000403084 2357 ntBASIC20.24■□□□□ 0.83
DNAAF1Q8NEP3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DNAAF1Q8NEP3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.24■□□□□ 0.83
DNAAF1Q8NEP3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF1Q8NEP3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF1Q8NEP3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF1Q8NEP3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF1Q8NEP3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF1Q8NEP3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF1Q8NEP3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF1Q8NEP3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF1Q8NEP3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF1Q8NEP3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF1Q8NEP3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.23■□□□□ 0.83
DNAAF1Q8NEP3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.23■□□□□ 0.83
DNAAF1Q8NEP3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF1Q8NEP3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.23■□□□□ 0.83
DNAAF1Q8NEP3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF1Q8NEP3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF1Q8NEP3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF1Q8NEP3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNAAF1Q8NEP3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
DNAAF1Q8NEP3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNAAF1Q8NEP3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
DNAAF1Q8NEP3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.22■□□□□ 0.83
DNAAF1Q8NEP3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNAAF1Q8NEP3 AC026202.3-201ENST00000600805 1127 ntBASIC20.22■□□□□ 0.83
DNAAF1Q8NEP3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.22■□□□□ 0.83
DNAAF1Q8NEP3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNAAF1Q8NEP3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNAAF1Q8NEP3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DNAAF1Q8NEP3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms