Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC36.91■■■■□ 3.5
CFAP43Q8NDM7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC36.91■■■■□ 3.5
CFAP43Q8NDM7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC36.91■■■■□ 3.5
CFAP43Q8NDM7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC36.9■■■■□ 3.5
CFAP43Q8NDM7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC36.9■■■■□ 3.5
CFAP43Q8NDM7 MIR6821-201ENST00000617625 74 ntBASIC36.9■■■■□ 3.5
CFAP43Q8NDM7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC36.89■■■■□ 3.5
CFAP43Q8NDM7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC36.89■■■■□ 3.5
CFAP43Q8NDM7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC36.89■■■■□ 3.5
CFAP43Q8NDM7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC36.89■■■■□ 3.5
CFAP43Q8NDM7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC36.89■■■■□ 3.5
CFAP43Q8NDM7 SNX5-217ENST00000606557 1087 ntBASIC36.89■■■■□ 3.5
CFAP43Q8NDM7 AC097639.1-201ENST00000565519 1891 ntBASIC36.89■■■■□ 3.5
CFAP43Q8NDM7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.5
CFAP43Q8NDM7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
CFAP43Q8NDM7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC36.88■■■■□ 3.49
CFAP43Q8NDM7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC36.87■■■■□ 3.49
CFAP43Q8NDM7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC36.87■■■■□ 3.49
CFAP43Q8NDM7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC36.87■■■■□ 3.49
CFAP43Q8NDM7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC36.87■■■■□ 3.49
CFAP43Q8NDM7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
CFAP43Q8NDM7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
CFAP43Q8NDM7 AC024257.2-201ENST00000549699 147 ntBASIC36.86■■■■□ 3.49
CFAP43Q8NDM7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC36.86■■■■□ 3.49
CFAP43Q8NDM7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC36.86■■■■□ 3.49
CFAP43Q8NDM7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC36.86■■■■□ 3.49
CFAP43Q8NDM7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
CFAP43Q8NDM7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC36.85■■■■□ 3.49
CFAP43Q8NDM7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC36.85■■■■□ 3.49
CFAP43Q8NDM7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
CFAP43Q8NDM7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
CFAP43Q8NDM7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC36.84■■■■□ 3.49
CFAP43Q8NDM7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC36.84■■■■□ 3.49
CFAP43Q8NDM7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC36.83■■■■□ 3.49
CFAP43Q8NDM7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
CFAP43Q8NDM7 AC097381.1-201ENST00000429019 1296 ntBASIC36.83■■■■□ 3.49
CFAP43Q8NDM7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC36.83■■■■□ 3.49
CFAP43Q8NDM7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC36.83■■■■□ 3.49
CFAP43Q8NDM7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC36.83■■■■□ 3.49
CFAP43Q8NDM7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC36.82■■■■□ 3.48
CFAP43Q8NDM7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC36.82■■■■□ 3.48
CFAP43Q8NDM7 MIR939-201ENST00000401314 82 ntBASIC36.81■■■■□ 3.48
CFAP43Q8NDM7 AP001330.3-201ENST00000520123 633 ntBASIC36.81■■■■□ 3.48
CFAP43Q8NDM7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
CFAP43Q8NDM7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC36.81■■■■□ 3.48
CFAP43Q8NDM7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
CFAP43Q8NDM7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
CFAP43Q8NDM7 AF213884.3-201ENST00000563833 479 ntBASIC36.8■■■■□ 3.48
CFAP43Q8NDM7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC36.8■■■■□ 3.48
CFAP43Q8NDM7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC36.79■■■■□ 3.48
CFAP43Q8NDM7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC36.79■■■■□ 3.48
CFAP43Q8NDM7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC36.79■■■■□ 3.48
CFAP43Q8NDM7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
CFAP43Q8NDM7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC36.79■■■■□ 3.48
CFAP43Q8NDM7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC36.79■■■■□ 3.48
CFAP43Q8NDM7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC36.78■■■■□ 3.48
CFAP43Q8NDM7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC36.78■■■■□ 3.48
CFAP43Q8NDM7 AL355001.2-201ENST00000620617 1191 ntBASIC36.78■■■■□ 3.48
CFAP43Q8NDM7 DUSP8P4-201ENST00000399538 1761 ntBASIC36.78■■■■□ 3.48
CFAP43Q8NDM7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
CFAP43Q8NDM7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC36.77■■■■□ 3.48
CFAP43Q8NDM7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC36.77■■■■□ 3.48
CFAP43Q8NDM7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
CFAP43Q8NDM7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
CFAP43Q8NDM7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC36.77■■■■□ 3.48
CFAP43Q8NDM7 AL162430.1-201ENST00000480705 870 ntBASIC36.77■■■■□ 3.48
CFAP43Q8NDM7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC36.76■■■■□ 3.48
CFAP43Q8NDM7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.48
CFAP43Q8NDM7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
CFAP43Q8NDM7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC36.75■■■■□ 3.47
CFAP43Q8NDM7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC36.75■■■■□ 3.47
CFAP43Q8NDM7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC36.75■■■■□ 3.47
CFAP43Q8NDM7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC36.74■■■■□ 3.47
CFAP43Q8NDM7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC36.73■■■■□ 3.47
CFAP43Q8NDM7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
CFAP43Q8NDM7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
CFAP43Q8NDM7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC36.73■■■■□ 3.47
CFAP43Q8NDM7 AC087623.3-201ENST00000607047 1098 ntBASIC36.73■■■■□ 3.47
CFAP43Q8NDM7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC36.73■■■■□ 3.47
CFAP43Q8NDM7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC36.72■■■■□ 3.47
CFAP43Q8NDM7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
CFAP43Q8NDM7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
CFAP43Q8NDM7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC36.72■■■■□ 3.47
CFAP43Q8NDM7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC36.72■■■■□ 3.47
CFAP43Q8NDM7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC36.72■■■■□ 3.47
CFAP43Q8NDM7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.47
CFAP43Q8NDM7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC36.71■■■■□ 3.47
CFAP43Q8NDM7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC36.71■■■■□ 3.47
CFAP43Q8NDM7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC36.71■■■■□ 3.47
CFAP43Q8NDM7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC36.71■■■■□ 3.47
CFAP43Q8NDM7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.47
CFAP43Q8NDM7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC36.7■■■■□ 3.47
CFAP43Q8NDM7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
CFAP43Q8NDM7 AL136967.2-201ENST00000623968 743 ntBASIC36.7■■■■□ 3.47
CFAP43Q8NDM7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
CFAP43Q8NDM7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
CFAP43Q8NDM7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC36.7■■■■□ 3.47
CFAP43Q8NDM7 GRAMD4P4-201ENST00000613563 1115 ntBASIC36.7■■■■□ 3.47
CFAP43Q8NDM7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC36.69■■■■□ 3.46
CFAP43Q8NDM7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms