Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.25■□□□□ 0.99
LSMEM1Q8N8F7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.25■□□□□ 0.99
LSMEM1Q8N8F7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LSMEM1Q8N8F7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LSMEM1Q8N8F7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LSMEM1Q8N8F7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LSMEM1Q8N8F7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
LSMEM1Q8N8F7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.24■□□□□ 0.99
LSMEM1Q8N8F7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.24■□□□□ 0.99
LSMEM1Q8N8F7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LSMEM1Q8N8F7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
LSMEM1Q8N8F7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LSMEM1Q8N8F7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LSMEM1Q8N8F7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.23■□□□□ 0.99
LSMEM1Q8N8F7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LSMEM1Q8N8F7 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.23■□□□□ 0.99
LSMEM1Q8N8F7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
LSMEM1Q8N8F7 AC004812.2-201ENST00000611079 2094 ntBASIC21.23■□□□□ 0.99
LSMEM1Q8N8F7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LSMEM1Q8N8F7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LSMEM1Q8N8F7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LSMEM1Q8N8F7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LSMEM1Q8N8F7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LSMEM1Q8N8F7 AC019171.1-201ENST00000601251 1056 ntBASIC21.22■□□□□ 0.99
LSMEM1Q8N8F7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LSMEM1Q8N8F7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
LSMEM1Q8N8F7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LSMEM1Q8N8F7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.21■□□□□ 0.99
LSMEM1Q8N8F7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.21■□□□□ 0.99
LSMEM1Q8N8F7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.21■□□□□ 0.99
LSMEM1Q8N8F7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LSMEM1Q8N8F7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LSMEM1Q8N8F7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LSMEM1Q8N8F7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LSMEM1Q8N8F7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.2■□□□□ 0.99
LSMEM1Q8N8F7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LSMEM1Q8N8F7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LSMEM1Q8N8F7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LSMEM1Q8N8F7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
LSMEM1Q8N8F7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LSMEM1Q8N8F7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LSMEM1Q8N8F7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
LSMEM1Q8N8F7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LSMEM1Q8N8F7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
LSMEM1Q8N8F7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LSMEM1Q8N8F7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LSMEM1Q8N8F7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.2■□□□□ 0.98
LSMEM1Q8N8F7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
LSMEM1Q8N8F7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.19■□□□□ 0.98
LSMEM1Q8N8F7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LSMEM1Q8N8F7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.19■□□□□ 0.98
LSMEM1Q8N8F7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
LSMEM1Q8N8F7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.19■□□□□ 0.98
LSMEM1Q8N8F7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.19■□□□□ 0.98
LSMEM1Q8N8F7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.18■□□□□ 0.98
LSMEM1Q8N8F7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
LSMEM1Q8N8F7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.18■□□□□ 0.98
LSMEM1Q8N8F7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LSMEM1Q8N8F7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LSMEM1Q8N8F7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.18■□□□□ 0.98
LSMEM1Q8N8F7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LSMEM1Q8N8F7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
LSMEM1Q8N8F7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.18■□□□□ 0.98
LSMEM1Q8N8F7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LSMEM1Q8N8F7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.17■□□□□ 0.98
LSMEM1Q8N8F7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.17■□□□□ 0.98
LSMEM1Q8N8F7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LSMEM1Q8N8F7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LSMEM1Q8N8F7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LSMEM1Q8N8F7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LSMEM1Q8N8F7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.17■□□□□ 0.98
LSMEM1Q8N8F7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LSMEM1Q8N8F7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LSMEM1Q8N8F7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LSMEM1Q8N8F7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LSMEM1Q8N8F7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LSMEM1Q8N8F7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LSMEM1Q8N8F7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LSMEM1Q8N8F7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.16■□□□□ 0.98
LSMEM1Q8N8F7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LSMEM1Q8N8F7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LSMEM1Q8N8F7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LSMEM1Q8N8F7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.15■□□□□ 0.98
LSMEM1Q8N8F7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSMEM1Q8N8F7 AC022616.5-201ENST00000518796 181 ntBASIC21.15■□□□□ 0.98
LSMEM1Q8N8F7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSMEM1Q8N8F7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSMEM1Q8N8F7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LSMEM1Q8N8F7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LSMEM1Q8N8F7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LSMEM1Q8N8F7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
LSMEM1Q8N8F7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LSMEM1Q8N8F7 AC133561.1-201ENST00000568600 2415 ntBASIC21.14■□□□□ 0.97
LSMEM1Q8N8F7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.14■□□□□ 0.97
LSMEM1Q8N8F7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.14■□□□□ 0.97
LSMEM1Q8N8F7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.14■□□□□ 0.97
LSMEM1Q8N8F7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.14■□□□□ 0.97
LSMEM1Q8N8F7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSMEM1Q8N8F7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSMEM1Q8N8F7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms