Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
PGBD3Q8N328 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PGBD3Q8N328 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PGBD3Q8N328 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PGBD3Q8N328 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PGBD3Q8N328 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PGBD3Q8N328 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
PGBD3Q8N328 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.57■■□□□ 1.36
PGBD3Q8N328 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PGBD3Q8N328 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PGBD3Q8N328 AC091060.1-201ENST00000623524 1766 ntBASIC23.56■■□□□ 1.36
PGBD3Q8N328 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PGBD3Q8N328 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.56■■□□□ 1.36
PGBD3Q8N328 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.56■■□□□ 1.36
PGBD3Q8N328 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PGBD3Q8N328 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PGBD3Q8N328 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PGBD3Q8N328 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PGBD3Q8N328 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
PGBD3Q8N328 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
PGBD3Q8N328 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
PGBD3Q8N328 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PGBD3Q8N328 SNX5-217ENST00000606557 1087 ntBASIC23.55■■□□□ 1.36
PGBD3Q8N328 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.55■■□□□ 1.36
PGBD3Q8N328 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PGBD3Q8N328 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
PGBD3Q8N328 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PGBD3Q8N328 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PGBD3Q8N328 AC097639.1-201ENST00000565519 1891 ntBASIC23.54■■□□□ 1.36
PGBD3Q8N328 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.54■■□□□ 1.36
PGBD3Q8N328 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PGBD3Q8N328 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.54■■□□□ 1.36
PGBD3Q8N328 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.54■■□□□ 1.36
PGBD3Q8N328 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.54■■□□□ 1.36
PGBD3Q8N328 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PGBD3Q8N328 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PGBD3Q8N328 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.53■■□□□ 1.36
PGBD3Q8N328 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PGBD3Q8N328 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.53■■□□□ 1.36
PGBD3Q8N328 PBX2P1-201ENST00000493219 1291 ntBASIC23.53■■□□□ 1.36
PGBD3Q8N328 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PGBD3Q8N328 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PGBD3Q8N328 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PGBD3Q8N328 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PGBD3Q8N328 ERN1-208ENST00000606895 2068 ntBASIC23.52■■□□□ 1.36
PGBD3Q8N328 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PGBD3Q8N328 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PGBD3Q8N328 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PGBD3Q8N328 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.52■■□□□ 1.36
PGBD3Q8N328 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.52■■□□□ 1.36
PGBD3Q8N328 MIR6722-201ENST00000617286 78 ntBASIC23.52■■□□□ 1.36
PGBD3Q8N328 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
PGBD3Q8N328 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PGBD3Q8N328 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PGBD3Q8N328 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.51■■□□□ 1.35
PGBD3Q8N328 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PGBD3Q8N328 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PGBD3Q8N328 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.51■■□□□ 1.35
PGBD3Q8N328 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PGBD3Q8N328 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.51■■□□□ 1.35
PGBD3Q8N328 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
PGBD3Q8N328 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.5■■□□□ 1.35
PGBD3Q8N328 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PGBD3Q8N328 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PGBD3Q8N328 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PGBD3Q8N328 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PGBD3Q8N328 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
PGBD3Q8N328 AC133561.4-201ENST00000566112 224 ntBASIC23.49■■□□□ 1.35
PGBD3Q8N328 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PGBD3Q8N328 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PGBD3Q8N328 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.48■■□□□ 1.35
PGBD3Q8N328 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.48■■□□□ 1.35
PGBD3Q8N328 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.48■■□□□ 1.35
PGBD3Q8N328 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
PGBD3Q8N328 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.48■■□□□ 1.35
PGBD3Q8N328 AC096887.2-201ENST00000623443 1957 ntBASIC23.48■■□□□ 1.35
PGBD3Q8N328 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PGBD3Q8N328 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.48■■□□□ 1.35
PGBD3Q8N328 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.48■■□□□ 1.35
PGBD3Q8N328 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PGBD3Q8N328 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PGBD3Q8N328 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.48■■□□□ 1.35
PGBD3Q8N328 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PGBD3Q8N328 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.47■■□□□ 1.35
PGBD3Q8N328 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.47■■□□□ 1.35
PGBD3Q8N328 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PGBD3Q8N328 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PGBD3Q8N328 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
PGBD3Q8N328 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PGBD3Q8N328 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PGBD3Q8N328 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PGBD3Q8N328 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PGBD3Q8N328 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
PGBD3Q8N328 AC106739.1-201ENST00000617035 715 ntBASIC23.46■■□□□ 1.35
PGBD3Q8N328 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.45■■□□□ 1.35
PGBD3Q8N328 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.35
PGBD3Q8N328 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PGBD3Q8N328 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PGBD3Q8N328 UNC93B3-201ENST00000308076 687 ntBASIC23.45■■□□□ 1.34
PGBD3Q8N328 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms