Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC116Q8IYX3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.87■■□□□ 1.09
CCDC116Q8IYX3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CCDC116Q8IYX3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
CCDC116Q8IYX3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC116Q8IYX3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC116Q8IYX3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CCDC116Q8IYX3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CCDC116Q8IYX3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.86■■□□□ 1.09
CCDC116Q8IYX3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.86■■□□□ 1.09
CCDC116Q8IYX3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.86■■□□□ 1.09
CCDC116Q8IYX3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC116Q8IYX3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CCDC116Q8IYX3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC116Q8IYX3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC116Q8IYX3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC116Q8IYX3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC116Q8IYX3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC116Q8IYX3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC116Q8IYX3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC116Q8IYX3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC116Q8IYX3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC116Q8IYX3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC116Q8IYX3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CCDC116Q8IYX3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC116Q8IYX3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC116Q8IYX3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC116Q8IYX3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC116Q8IYX3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC116Q8IYX3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC116Q8IYX3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.83■■□□□ 1.09
CCDC116Q8IYX3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC116Q8IYX3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC116Q8IYX3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC116Q8IYX3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC116Q8IYX3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC116Q8IYX3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.83■■□□□ 1.09
CCDC116Q8IYX3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC116Q8IYX3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC116Q8IYX3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC116Q8IYX3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC116Q8IYX3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC116Q8IYX3 AC141586.4-201ENST00000624558 1573 ntBASIC21.82■■□□□ 1.08
CCDC116Q8IYX3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC116Q8IYX3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC116Q8IYX3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC116Q8IYX3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CCDC116Q8IYX3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC116Q8IYX3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC116Q8IYX3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.82■■□□□ 1.08
CCDC116Q8IYX3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC116Q8IYX3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CCDC116Q8IYX3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC116Q8IYX3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CCDC116Q8IYX3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC116Q8IYX3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC116Q8IYX3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.81■■□□□ 1.08
CCDC116Q8IYX3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC116Q8IYX3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC116Q8IYX3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC116Q8IYX3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CCDC116Q8IYX3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC116Q8IYX3 AC011551.1-201ENST00000614101 683 ntBASIC21.8■■□□□ 1.08
CCDC116Q8IYX3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC116Q8IYX3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC116Q8IYX3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC116Q8IYX3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC116Q8IYX3 AC120024.1-201ENST00000562672 995 ntBASIC21.79■■□□□ 1.08
CCDC116Q8IYX3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CCDC116Q8IYX3 KRT8P33-201ENST00000508125 1423 ntBASIC21.79■■□□□ 1.08
CCDC116Q8IYX3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC116Q8IYX3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC116Q8IYX3 AC004812.2-201ENST00000611079 2094 ntBASIC21.78■■□□□ 1.08
CCDC116Q8IYX3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC116Q8IYX3 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC116Q8IYX3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC116Q8IYX3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CCDC116Q8IYX3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC116Q8IYX3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.77■■□□□ 1.08
CCDC116Q8IYX3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC116Q8IYX3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC116Q8IYX3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC116Q8IYX3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC116Q8IYX3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC116Q8IYX3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CCDC116Q8IYX3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC116Q8IYX3 AC103834.1-201ENST00000520383 144 ntBASIC21.77■■□□□ 1.08
CCDC116Q8IYX3 MIR4508-201ENST00000584178 70 ntBASIC21.77■■□□□ 1.08
CCDC116Q8IYX3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC116Q8IYX3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CCDC116Q8IYX3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC116Q8IYX3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC116Q8IYX3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC116Q8IYX3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC116Q8IYX3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC116Q8IYX3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC116Q8IYX3 KRT18P24-201ENST00000344739 1156 ntBASIC21.76■■□□□ 1.07
CCDC116Q8IYX3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.76■■□□□ 1.07
CCDC116Q8IYX3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC116Q8IYX3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms