Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VRK2Q86Y07 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
VRK2Q86Y07 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VRK2Q86Y07 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VRK2Q86Y07 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VRK2Q86Y07 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VRK2Q86Y07 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.44■■□□□ 1.02
VRK2Q86Y07 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VRK2Q86Y07 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VRK2Q86Y07 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VRK2Q86Y07 AL592295.1-201ENST00000400984 884 ntBASIC21.44■■□□□ 1.02
VRK2Q86Y07 LONRF2P2-201ENST00000439212 571 ntBASIC21.44■■□□□ 1.02
VRK2Q86Y07 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.44■■□□□ 1.02
VRK2Q86Y07 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
VRK2Q86Y07 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.44■■□□□ 1.02
VRK2Q86Y07 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
VRK2Q86Y07 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.44■■□□□ 1.02
VRK2Q86Y07 AC090877.2-201ENST00000558441 1738 ntBASIC21.43■■□□□ 1.02
VRK2Q86Y07 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.43■■□□□ 1.02
VRK2Q86Y07 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.43■■□□□ 1.02
VRK2Q86Y07 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VRK2Q86Y07 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.43■■□□□ 1.02
VRK2Q86Y07 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
VRK2Q86Y07 DUX4L18-201ENST00000553347 1267 ntBASIC21.43■■□□□ 1.02
VRK2Q86Y07 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
VRK2Q86Y07 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.43■■□□□ 1.02
VRK2Q86Y07 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.43■■□□□ 1.02
VRK2Q86Y07 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VRK2Q86Y07 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
VRK2Q86Y07 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VRK2Q86Y07 NTF6A-201ENST00000591175 560 ntBASIC21.42■■□□□ 1.02
VRK2Q86Y07 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.42■■□□□ 1.02
VRK2Q86Y07 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VRK2Q86Y07 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VRK2Q86Y07 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VRK2Q86Y07 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VRK2Q86Y07 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VRK2Q86Y07 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.41■■□□□ 1.02
VRK2Q86Y07 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.41■■□□□ 1.02
VRK2Q86Y07 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
VRK2Q86Y07 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
VRK2Q86Y07 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
VRK2Q86Y07 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
VRK2Q86Y07 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.4■■□□□ 1.02
VRK2Q86Y07 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.4■■□□□ 1.02
VRK2Q86Y07 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VRK2Q86Y07 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
VRK2Q86Y07 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.39■■□□□ 1.02
VRK2Q86Y07 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
VRK2Q86Y07 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.39■■□□□ 1.01
VRK2Q86Y07 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.39■■□□□ 1.01
VRK2Q86Y07 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.39■■□□□ 1.01
VRK2Q86Y07 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
VRK2Q86Y07 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
VRK2Q86Y07 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
VRK2Q86Y07 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
VRK2Q86Y07 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VRK2Q86Y07 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
VRK2Q86Y07 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
VRK2Q86Y07 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VRK2Q86Y07 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
VRK2Q86Y07 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VRK2Q86Y07 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VRK2Q86Y07 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.38■■□□□ 1.01
VRK2Q86Y07 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
VRK2Q86Y07 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VRK2Q86Y07 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
VRK2Q86Y07 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VRK2Q86Y07 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VRK2Q86Y07 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
VRK2Q86Y07 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
VRK2Q86Y07 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
VRK2Q86Y07 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.37■■□□□ 1.01
VRK2Q86Y07 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.37■■□□□ 1.01
VRK2Q86Y07 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VRK2Q86Y07 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VRK2Q86Y07 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VRK2Q86Y07 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.36■■□□□ 1.01
VRK2Q86Y07 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VRK2Q86Y07 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VRK2Q86Y07 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VRK2Q86Y07 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VRK2Q86Y07 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.36■■□□□ 1.01
VRK2Q86Y07 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
VRK2Q86Y07 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VRK2Q86Y07 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VRK2Q86Y07 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VRK2Q86Y07 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VRK2Q86Y07 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
VRK2Q86Y07 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
VRK2Q86Y07 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
VRK2Q86Y07 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VRK2Q86Y07 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
VRK2Q86Y07 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
VRK2Q86Y07 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VRK2Q86Y07 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.35■■□□□ 1.01
VRK2Q86Y07 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VRK2Q86Y07 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
VRK2Q86Y07 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
VRK2Q86Y07 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms