Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.12■■□□□ 1.29
ZC3HC1Q86WB0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZC3HC1Q86WB0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
ZC3HC1Q86WB0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ZC3HC1Q86WB0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
ZC3HC1Q86WB0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.12■■□□□ 1.29
ZC3HC1Q86WB0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.12■■□□□ 1.29
ZC3HC1Q86WB0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
ZC3HC1Q86WB0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
ZC3HC1Q86WB0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZC3HC1Q86WB0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZC3HC1Q86WB0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.11■■□□□ 1.29
ZC3HC1Q86WB0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
ZC3HC1Q86WB0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.11■■□□□ 1.29
ZC3HC1Q86WB0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZC3HC1Q86WB0 AC090877.2-201ENST00000558441 1738 ntBASIC23.11■■□□□ 1.29
ZC3HC1Q86WB0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZC3HC1Q86WB0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
ZC3HC1Q86WB0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.1■■□□□ 1.29
ZC3HC1Q86WB0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ZC3HC1Q86WB0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZC3HC1Q86WB0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.1■■□□□ 1.29
ZC3HC1Q86WB0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ZC3HC1Q86WB0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ZC3HC1Q86WB0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ZC3HC1Q86WB0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
ZC3HC1Q86WB0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.09■■□□□ 1.29
ZC3HC1Q86WB0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.09■■□□□ 1.29
ZC3HC1Q86WB0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZC3HC1Q86WB0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
ZC3HC1Q86WB0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.08■■□□□ 1.29
ZC3HC1Q86WB0 AL592295.1-201ENST00000400984 884 ntBASIC23.08■■□□□ 1.29
ZC3HC1Q86WB0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.08■■□□□ 1.29
ZC3HC1Q86WB0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ZC3HC1Q86WB0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.08■■□□□ 1.28
ZC3HC1Q86WB0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZC3HC1Q86WB0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ZC3HC1Q86WB0 AC129492.7-201ENST00000622992 756 ntBASIC23.07■■□□□ 1.28
ZC3HC1Q86WB0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZC3HC1Q86WB0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ZC3HC1Q86WB0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ZC3HC1Q86WB0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.06■■□□□ 1.28
ZC3HC1Q86WB0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.06■■□□□ 1.28
ZC3HC1Q86WB0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.06■■□□□ 1.28
ZC3HC1Q86WB0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ZC3HC1Q86WB0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.05■■□□□ 1.28
ZC3HC1Q86WB0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZC3HC1Q86WB0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZC3HC1Q86WB0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ZC3HC1Q86WB0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZC3HC1Q86WB0 KRT18P60-201ENST00000312876 1297 ntBASIC23.05■■□□□ 1.28
ZC3HC1Q86WB0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZC3HC1Q86WB0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZC3HC1Q86WB0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.05■■□□□ 1.28
ZC3HC1Q86WB0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZC3HC1Q86WB0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
ZC3HC1Q86WB0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZC3HC1Q86WB0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZC3HC1Q86WB0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.04■■□□□ 1.28
ZC3HC1Q86WB0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZC3HC1Q86WB0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
ZC3HC1Q86WB0 LONRF2P2-201ENST00000439212 571 ntBASIC23.04■■□□□ 1.28
ZC3HC1Q86WB0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZC3HC1Q86WB0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.04■■□□□ 1.28
ZC3HC1Q86WB0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
ZC3HC1Q86WB0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ZC3HC1Q86WB0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.04■■□□□ 1.28
ZC3HC1Q86WB0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3HC1Q86WB0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3HC1Q86WB0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3HC1Q86WB0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3HC1Q86WB0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3HC1Q86WB0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3HC1Q86WB0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
ZC3HC1Q86WB0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3HC1Q86WB0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3HC1Q86WB0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.02■■□□□ 1.28
ZC3HC1Q86WB0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3HC1Q86WB0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3HC1Q86WB0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3HC1Q86WB0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3HC1Q86WB0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3HC1Q86WB0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3HC1Q86WB0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3HC1Q86WB0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3HC1Q86WB0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3HC1Q86WB0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3HC1Q86WB0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3HC1Q86WB0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.01■■□□□ 1.27
ZC3HC1Q86WB0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3HC1Q86WB0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23■■□□□ 1.27
ZC3HC1Q86WB0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23■■□□□ 1.27
ZC3HC1Q86WB0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23■■□□□ 1.27
ZC3HC1Q86WB0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23■■□□□ 1.27
ZC3HC1Q86WB0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
ZC3HC1Q86WB0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ZC3HC1Q86WB0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23■■□□□ 1.27
ZC3HC1Q86WB0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ZC3HC1Q86WB0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
ZC3HC1Q86WB0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms