Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 AC004448.1-201ENST00000458332 883 ntBASIC25.32■■□□□ 1.64
RTN4RL1Q86UN2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.32■■□□□ 1.64
RTN4RL1Q86UN2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.32■■□□□ 1.64
RTN4RL1Q86UN2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
RTN4RL1Q86UN2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.31■■□□□ 1.64
RTN4RL1Q86UN2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RTN4RL1Q86UN2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.31■■□□□ 1.64
RTN4RL1Q86UN2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.31■■□□□ 1.64
RTN4RL1Q86UN2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RTN4RL1Q86UN2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RTN4RL1Q86UN2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
RTN4RL1Q86UN2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTN4RL1Q86UN2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTN4RL1Q86UN2 AC092803.2-201ENST00000564287 1899 ntBASIC25.3■■□□□ 1.64
RTN4RL1Q86UN2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RTN4RL1Q86UN2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
RTN4RL1Q86UN2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RTN4RL1Q86UN2 AL031432.3-201ENST00000607698 485 ntBASIC25.29■■□□□ 1.64
RTN4RL1Q86UN2 AL121749.1-202ENST00000609313 2153 ntBASIC25.29■■□□□ 1.64
RTN4RL1Q86UN2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RTN4RL1Q86UN2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.28■■□□□ 1.64
RTN4RL1Q86UN2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RTN4RL1Q86UN2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
RTN4RL1Q86UN2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RTN4RL1Q86UN2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.27■■□□□ 1.64
RTN4RL1Q86UN2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RTN4RL1Q86UN2 ZNRF2P3-201ENST00000424200 374 ntBASIC25.27■■□□□ 1.64
RTN4RL1Q86UN2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.27■■□□□ 1.64
RTN4RL1Q86UN2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
RTN4RL1Q86UN2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.27■■□□□ 1.64
RTN4RL1Q86UN2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RTN4RL1Q86UN2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RTN4RL1Q86UN2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
RTN4RL1Q86UN2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RTN4RL1Q86UN2 SUDS3P1-201ENST00000505831 966 ntBASIC25.26■■□□□ 1.63
RTN4RL1Q86UN2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RTN4RL1Q86UN2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RTN4RL1Q86UN2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
RTN4RL1Q86UN2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RTN4RL1Q86UN2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RTN4RL1Q86UN2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
RTN4RL1Q86UN2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RTN4RL1Q86UN2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.25■■□□□ 1.63
RTN4RL1Q86UN2 AL136162.1-201ENST00000607711 1078 ntBASIC25.25■■□□□ 1.63
RTN4RL1Q86UN2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RTN4RL1Q86UN2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.24■■□□□ 1.63
RTN4RL1Q86UN2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RTN4RL1Q86UN2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
RTN4RL1Q86UN2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.24■■□□□ 1.63
RTN4RL1Q86UN2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RTN4RL1Q86UN2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RTN4RL1Q86UN2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RTN4RL1Q86UN2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
RTN4RL1Q86UN2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
RTN4RL1Q86UN2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RTN4RL1Q86UN2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RTN4RL1Q86UN2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.23■■□□□ 1.63
RTN4RL1Q86UN2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.23■■□□□ 1.63
RTN4RL1Q86UN2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
RTN4RL1Q86UN2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.22■■□□□ 1.63
RTN4RL1Q86UN2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
RTN4RL1Q86UN2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.22■■□□□ 1.63
RTN4RL1Q86UN2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
RTN4RL1Q86UN2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.21■■□□□ 1.63
RTN4RL1Q86UN2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RTN4RL1Q86UN2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RTN4RL1Q86UN2 SRD5A1P1-201ENST00000442297 786 ntBASIC25.21■■□□□ 1.63
RTN4RL1Q86UN2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RTN4RL1Q86UN2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
RTN4RL1Q86UN2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.21■■□□□ 1.63
RTN4RL1Q86UN2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
RTN4RL1Q86UN2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RTN4RL1Q86UN2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
RTN4RL1Q86UN2 SLC6A10P-202ENST00000431994 2058 ntBASIC25.21■■□□□ 1.63
RTN4RL1Q86UN2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.2■■□□□ 1.62
RTN4RL1Q86UN2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RTN4RL1Q86UN2 AC024257.2-201ENST00000549699 147 ntBASIC25.2■■□□□ 1.62
RTN4RL1Q86UN2 AC142381.2-201ENST00000566120 298 ntBASIC25.2■■□□□ 1.62
RTN4RL1Q86UN2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.2■■□□□ 1.62
RTN4RL1Q86UN2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RTN4RL1Q86UN2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.19■■□□□ 1.62
RTN4RL1Q86UN2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
RTN4RL1Q86UN2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.19■■□□□ 1.62
RTN4RL1Q86UN2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
RTN4RL1Q86UN2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.19■■□□□ 1.62
RTN4RL1Q86UN2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.19■■□□□ 1.62
RTN4RL1Q86UN2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTN4RL1Q86UN2 AC135279.3-201ENST00000610945 1311 ntBASIC25.18■■□□□ 1.62
RTN4RL1Q86UN2 AC131274.2-201ENST00000580697 1507 ntBASIC25.18■■□□□ 1.62
RTN4RL1Q86UN2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RTN4RL1Q86UN2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTN4RL1Q86UN2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RTN4RL1Q86UN2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.18■■□□□ 1.62
RTN4RL1Q86UN2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTN4RL1Q86UN2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.18■■□□□ 1.62
RTN4RL1Q86UN2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTN4RL1Q86UN2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTN4RL1Q86UN2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.18■■□□□ 1.62
RTN4RL1Q86UN2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RTN4RL1Q86UN2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms