Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RNF180Q86T96 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RNF180Q86T96 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.04■■□□□ 1.76
RNF180Q86T96 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RNF180Q86T96 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RNF180Q86T96 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
RNF180Q86T96 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RNF180Q86T96 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC26.03■■□□□ 1.76
RNF180Q86T96 AP001330.3-201ENST00000520123 633 ntBASIC26.03■■□□□ 1.76
RNF180Q86T96 AC092171.4-201ENST00000609130 632 ntBASIC26.03■■□□□ 1.76
RNF180Q86T96 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.03■■□□□ 1.76
RNF180Q86T96 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RNF180Q86T96 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
RNF180Q86T96 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RNF180Q86T96 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.02■■□□□ 1.76
RNF180Q86T96 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.02■■□□□ 1.76
RNF180Q86T96 AC091305.1-201ENST00000479476 895 ntBASIC26.02■■□□□ 1.76
RNF180Q86T96 SYT6-210ENST00000641643 1587 ntBASIC26.02■■□□□ 1.76
RNF180Q86T96 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.02■■□□□ 1.76
RNF180Q86T96 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RNF180Q86T96 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RNF180Q86T96 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RNF180Q86T96 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.01■■□□□ 1.75
RNF180Q86T96 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
RNF180Q86T96 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26■■□□□ 1.75
RNF180Q86T96 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
RNF180Q86T96 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26■■□□□ 1.75
RNF180Q86T96 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26■■□□□ 1.75
RNF180Q86T96 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26■■□□□ 1.75
RNF180Q86T96 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26■■□□□ 1.75
RNF180Q86T96 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.99■■□□□ 1.75
RNF180Q86T96 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RNF180Q86T96 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.99■■□□□ 1.75
RNF180Q86T96 MIR6821-201ENST00000617625 74 ntBASIC25.99■■□□□ 1.75
RNF180Q86T96 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.99■■□□□ 1.75
RNF180Q86T96 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.98■■□□□ 1.75
RNF180Q86T96 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.98■■□□□ 1.75
RNF180Q86T96 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.97■■□□□ 1.75
RNF180Q86T96 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RNF180Q86T96 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
RNF180Q86T96 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.97■■□□□ 1.75
RNF180Q86T96 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.97■■□□□ 1.75
RNF180Q86T96 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RNF180Q86T96 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.97■■□□□ 1.75
RNF180Q86T96 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF180Q86T96 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
RNF180Q86T96 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF180Q86T96 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
RNF180Q86T96 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.96■■□□□ 1.75
RNF180Q86T96 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF180Q86T96 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF180Q86T96 MIR4767-201ENST00000582827 78 ntBASIC25.96■■□□□ 1.75
RNF180Q86T96 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
RNF180Q86T96 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.95■■□□□ 1.75
RNF180Q86T96 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.95■■□□□ 1.74
RNF180Q86T96 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RNF180Q86T96 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.95■■□□□ 1.74
RNF180Q86T96 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
RNF180Q86T96 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RNF180Q86T96 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.95■■□□□ 1.74
RNF180Q86T96 AC097381.1-201ENST00000429019 1296 ntBASIC25.95■■□□□ 1.74
RNF180Q86T96 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
RNF180Q86T96 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RNF180Q86T96 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RNF180Q86T96 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
RNF180Q86T96 AC096887.2-201ENST00000623443 1957 ntBASIC25.95■■□□□ 1.74
RNF180Q86T96 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
RNF180Q86T96 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RNF180Q86T96 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
RNF180Q86T96 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.94■■□□□ 1.74
RNF180Q86T96 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RNF180Q86T96 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
RNF180Q86T96 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RNF180Q86T96 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RNF180Q86T96 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RNF180Q86T96 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.93■■□□□ 1.74
RNF180Q86T96 RASA4CP-201ENST00000424092 1398 ntBASIC25.93■■□□□ 1.74
RNF180Q86T96 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RNF180Q86T96 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RNF180Q86T96 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RNF180Q86T96 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.92■■□□□ 1.74
RNF180Q86T96 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.92■■□□□ 1.74
RNF180Q86T96 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.92■■□□□ 1.74
RNF180Q86T96 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.92■■□□□ 1.74
RNF180Q86T96 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
RNF180Q86T96 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
RNF180Q86T96 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.91■■□□□ 1.74
RNF180Q86T96 CA15P2-201ENST00000611168 834 ntBASIC25.91■■□□□ 1.74
RNF180Q86T96 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RNF180Q86T96 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RNF180Q86T96 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.9■■□□□ 1.74
RNF180Q86T96 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RNF180Q86T96 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RNF180Q86T96 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
RNF180Q86T96 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
RNF180Q86T96 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
RNF180Q86T96 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.9■■□□□ 1.74
RNF180Q86T96 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
RNF180Q86T96 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
RNF180Q86T96 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms