Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf139Q6ZV77 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.82■□□□□ 0.6
C9orf139Q6ZV77 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.81■□□□□ 0.6
C9orf139Q6ZV77 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf139Q6ZV77 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.81■□□□□ 0.6
C9orf139Q6ZV77 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf139Q6ZV77 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.81■□□□□ 0.6
C9orf139Q6ZV77 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.81■□□□□ 0.6
C9orf139Q6ZV77 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.81■□□□□ 0.6
C9orf139Q6ZV77 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
C9orf139Q6ZV77 AC092803.2-201ENST00000564287 1899 ntBASIC18.81■□□□□ 0.6
C9orf139Q6ZV77 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf139Q6ZV77 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.81■□□□□ 0.6
C9orf139Q6ZV77 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf139Q6ZV77 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf139Q6ZV77 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf139Q6ZV77 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf139Q6ZV77 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf139Q6ZV77 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf139Q6ZV77 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.79■□□□□ 0.6
C9orf139Q6ZV77 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
C9orf139Q6ZV77 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
C9orf139Q6ZV77 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf139Q6ZV77 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.78■□□□□ 0.6
C9orf139Q6ZV77 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.78■□□□□ 0.6
C9orf139Q6ZV77 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf139Q6ZV77 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf139Q6ZV77 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf139Q6ZV77 AC004448.1-201ENST00000458332 883 ntBASIC18.78■□□□□ 0.6
C9orf139Q6ZV77 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.78■□□□□ 0.6
C9orf139Q6ZV77 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf139Q6ZV77 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.78■□□□□ 0.6
C9orf139Q6ZV77 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C9orf139Q6ZV77 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.77■□□□□ 0.6
C9orf139Q6ZV77 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
C9orf139Q6ZV77 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C9orf139Q6ZV77 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C9orf139Q6ZV77 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
C9orf139Q6ZV77 AC133561.4-201ENST00000566112 224 ntBASIC18.77■□□□□ 0.6
C9orf139Q6ZV77 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C9orf139Q6ZV77 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
C9orf139Q6ZV77 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.77■□□□□ 0.59
C9orf139Q6ZV77 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
C9orf139Q6ZV77 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.77■□□□□ 0.59
C9orf139Q6ZV77 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.77■□□□□ 0.59
C9orf139Q6ZV77 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C9orf139Q6ZV77 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
C9orf139Q6ZV77 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
C9orf139Q6ZV77 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
C9orf139Q6ZV77 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.76■□□□□ 0.59
C9orf139Q6ZV77 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
C9orf139Q6ZV77 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
C9orf139Q6ZV77 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C9orf139Q6ZV77 AC110285.6-201ENST00000617652 491 ntBASIC18.76■□□□□ 0.59
C9orf139Q6ZV77 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.76■□□□□ 0.59
C9orf139Q6ZV77 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
C9orf139Q6ZV77 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
C9orf139Q6ZV77 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
C9orf139Q6ZV77 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
C9orf139Q6ZV77 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
C9orf139Q6ZV77 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.75■□□□□ 0.59
C9orf139Q6ZV77 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.75■□□□□ 0.59
C9orf139Q6ZV77 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
C9orf139Q6ZV77 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.75■□□□□ 0.59
C9orf139Q6ZV77 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.75■□□□□ 0.59
C9orf139Q6ZV77 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
C9orf139Q6ZV77 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
C9orf139Q6ZV77 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
C9orf139Q6ZV77 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
C9orf139Q6ZV77 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
C9orf139Q6ZV77 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
C9orf139Q6ZV77 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.74■□□□□ 0.59
C9orf139Q6ZV77 AC096631.2-201ENST00000436136 790 ntBASIC18.74■□□□□ 0.59
C9orf139Q6ZV77 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.74■□□□□ 0.59
C9orf139Q6ZV77 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
C9orf139Q6ZV77 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
C9orf139Q6ZV77 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
C9orf139Q6ZV77 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
C9orf139Q6ZV77 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
C9orf139Q6ZV77 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.73■□□□□ 0.59
C9orf139Q6ZV77 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
C9orf139Q6ZV77 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
C9orf139Q6ZV77 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
C9orf139Q6ZV77 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
C9orf139Q6ZV77 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
C9orf139Q6ZV77 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C9orf139Q6ZV77 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C9orf139Q6ZV77 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
C9orf139Q6ZV77 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.72■□□□□ 0.59
C9orf139Q6ZV77 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.72■□□□□ 0.59
C9orf139Q6ZV77 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.72■□□□□ 0.59
C9orf139Q6ZV77 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
C9orf139Q6ZV77 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
C9orf139Q6ZV77 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
C9orf139Q6ZV77 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.71■□□□□ 0.59
C9orf139Q6ZV77 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
C9orf139Q6ZV77 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C9orf139Q6ZV77 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C9orf139Q6ZV77 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.71■□□□□ 0.59
C9orf139Q6ZV77 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms