Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.95■■□□□ 1.74
RUFY4Q6ZNE9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RUFY4Q6ZNE9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.95■■□□□ 1.74
RUFY4Q6ZNE9 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RUFY4Q6ZNE9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RUFY4Q6ZNE9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.94■■□□□ 1.74
RUFY4Q6ZNE9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.94■■□□□ 1.74
RUFY4Q6ZNE9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RUFY4Q6ZNE9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RUFY4Q6ZNE9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RUFY4Q6ZNE9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.93■■□□□ 1.74
RUFY4Q6ZNE9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.93■■□□□ 1.74
RUFY4Q6ZNE9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.93■■□□□ 1.74
RUFY4Q6ZNE9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
RUFY4Q6ZNE9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.93■■□□□ 1.74
RUFY4Q6ZNE9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.93■■□□□ 1.74
RUFY4Q6ZNE9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
RUFY4Q6ZNE9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.93■■□□□ 1.74
RUFY4Q6ZNE9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
RUFY4Q6ZNE9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RUFY4Q6ZNE9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
RUFY4Q6ZNE9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.92■■□□□ 1.74
RUFY4Q6ZNE9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RUFY4Q6ZNE9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RUFY4Q6ZNE9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RUFY4Q6ZNE9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
RUFY4Q6ZNE9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.9■■□□□ 1.74
RUFY4Q6ZNE9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
RUFY4Q6ZNE9 AL136116.3-201ENST00000402907 1138 ntBASIC25.9■■□□□ 1.74
RUFY4Q6ZNE9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.9■■□□□ 1.74
RUFY4Q6ZNE9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
RUFY4Q6ZNE9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.89■■□□□ 1.74
RUFY4Q6ZNE9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
RUFY4Q6ZNE9 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.89■■□□□ 1.74
RUFY4Q6ZNE9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RUFY4Q6ZNE9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
RUFY4Q6ZNE9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
RUFY4Q6ZNE9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.89■■□□□ 1.73
RUFY4Q6ZNE9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.88■■□□□ 1.73
RUFY4Q6ZNE9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RUFY4Q6ZNE9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RUFY4Q6ZNE9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.88■■□□□ 1.73
RUFY4Q6ZNE9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
RUFY4Q6ZNE9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RUFY4Q6ZNE9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.88■■□□□ 1.73
RUFY4Q6ZNE9 AC092803.2-201ENST00000564287 1899 ntBASIC25.88■■□□□ 1.73
RUFY4Q6ZNE9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
RUFY4Q6ZNE9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RUFY4Q6ZNE9 MIR4466-201ENST00000606121 54 ntBASIC25.88■■□□□ 1.73
RUFY4Q6ZNE9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.88■■□□□ 1.73
RUFY4Q6ZNE9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RUFY4Q6ZNE9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.87■■□□□ 1.73
RUFY4Q6ZNE9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.87■■□□□ 1.73
RUFY4Q6ZNE9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.87■■□□□ 1.73
RUFY4Q6ZNE9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RUFY4Q6ZNE9 AL356740.2-201ENST00000601559 647 ntBASIC25.87■■□□□ 1.73
RUFY4Q6ZNE9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
RUFY4Q6ZNE9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
RUFY4Q6ZNE9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RUFY4Q6ZNE9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
RUFY4Q6ZNE9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RUFY4Q6ZNE9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
RUFY4Q6ZNE9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RUFY4Q6ZNE9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RUFY4Q6ZNE9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
RUFY4Q6ZNE9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
RUFY4Q6ZNE9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.86■■□□□ 1.73
RUFY4Q6ZNE9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.86■■□□□ 1.73
RUFY4Q6ZNE9 SNX5-217ENST00000606557 1087 ntBASIC25.86■■□□□ 1.73
RUFY4Q6ZNE9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
RUFY4Q6ZNE9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.86■■□□□ 1.73
RUFY4Q6ZNE9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RUFY4Q6ZNE9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
RUFY4Q6ZNE9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
RUFY4Q6ZNE9 MIR638-201ENST00000385237 100 ntBASIC25.85■■□□□ 1.73
RUFY4Q6ZNE9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.85■■□□□ 1.73
RUFY4Q6ZNE9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RUFY4Q6ZNE9 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.85■■□□□ 1.73
RUFY4Q6ZNE9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.84■■□□□ 1.73
RUFY4Q6ZNE9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.84■■□□□ 1.73
RUFY4Q6ZNE9 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.84■■□□□ 1.73
RUFY4Q6ZNE9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.84■■□□□ 1.73
RUFY4Q6ZNE9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RUFY4Q6ZNE9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RUFY4Q6ZNE9 AL512631.2-201ENST00000604634 923 ntBASIC25.84■■□□□ 1.73
RUFY4Q6ZNE9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.84■■□□□ 1.73
RUFY4Q6ZNE9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RUFY4Q6ZNE9 AC145676.1-201ENST00000514988 2004 ntBASIC25.83■■□□□ 1.73
RUFY4Q6ZNE9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RUFY4Q6ZNE9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.83■■□□□ 1.73
RUFY4Q6ZNE9 AC020928.2-201ENST00000588717 2197 ntBASIC25.83■■□□□ 1.73
RUFY4Q6ZNE9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RUFY4Q6ZNE9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
RUFY4Q6ZNE9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RUFY4Q6ZNE9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
RUFY4Q6ZNE9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RUFY4Q6ZNE9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.82■■□□□ 1.72
RUFY4Q6ZNE9 AL139246.5-201ENST00000606645 996 ntBASIC25.82■■□□□ 1.72
RUFY4Q6ZNE9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
RUFY4Q6ZNE9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms