Protein–RNA interactions for Protein: Q63HM2

PCNX4, Pecanex-like protein 4, humanhuman

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4Q63HM2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.35■■□□□ 1.81
PCNX4Q63HM2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.35■■□□□ 1.81
PCNX4Q63HM2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCNX4Q63HM2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCNX4Q63HM2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
PCNX4Q63HM2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.34■■□□□ 1.81
PCNX4Q63HM2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.34■■□□□ 1.81
PCNX4Q63HM2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.34■■□□□ 1.81
PCNX4Q63HM2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCNX4Q63HM2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.34■■□□□ 1.81
PCNX4Q63HM2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCNX4Q63HM2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCNX4Q63HM2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCNX4Q63HM2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCNX4Q63HM2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PCNX4Q63HM2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.33■■□□□ 1.81
PCNX4Q63HM2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.33■■□□□ 1.81
PCNX4Q63HM2 MIR6722-201ENST00000617286 78 ntBASIC26.33■■□□□ 1.81
PCNX4Q63HM2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.33■■□□□ 1.81
PCNX4Q63HM2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCNX4Q63HM2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
PCNX4Q63HM2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
PCNX4Q63HM2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
PCNX4Q63HM2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCNX4Q63HM2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.32■■□□□ 1.8
PCNX4Q63HM2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.32■■□□□ 1.8
PCNX4Q63HM2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
PCNX4Q63HM2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.32■■□□□ 1.8
PCNX4Q63HM2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.31■■□□□ 1.8
PCNX4Q63HM2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.31■■□□□ 1.8
PCNX4Q63HM2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCNX4Q63HM2 AC004448.1-201ENST00000458332 883 ntBASIC26.31■■□□□ 1.8
PCNX4Q63HM2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.31■■□□□ 1.8
PCNX4Q63HM2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.31■■□□□ 1.8
PCNX4Q63HM2 AL117332.1-201ENST00000622628 974 ntBASIC26.31■■□□□ 1.8
PCNX4Q63HM2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCNX4Q63HM2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.31■■□□□ 1.8
PCNX4Q63HM2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCNX4Q63HM2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PCNX4Q63HM2 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.3■■□□□ 1.8
PCNX4Q63HM2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.3■■□□□ 1.8
PCNX4Q63HM2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PCNX4Q63HM2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.29■■□□□ 1.8
PCNX4Q63HM2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.29■■□□□ 1.8
PCNX4Q63HM2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
PCNX4Q63HM2 MIR3621-201ENST00000580529 85 ntBASIC26.29■■□□□ 1.8
PCNX4Q63HM2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.28■■□□□ 1.8
PCNX4Q63HM2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCNX4Q63HM2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.28■■□□□ 1.8
PCNX4Q63HM2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCNX4Q63HM2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.28■■□□□ 1.8
PCNX4Q63HM2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCNX4Q63HM2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.27■■□□□ 1.8
PCNX4Q63HM2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCNX4Q63HM2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCNX4Q63HM2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCNX4Q63HM2 AC131274.2-201ENST00000580697 1507 ntBASIC26.26■■□□□ 1.79
PCNX4Q63HM2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCNX4Q63HM2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.26■■□□□ 1.79
PCNX4Q63HM2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.26■■□□□ 1.79
PCNX4Q63HM2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.26■■□□□ 1.79
PCNX4Q63HM2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
PCNX4Q63HM2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCNX4Q63HM2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCNX4Q63HM2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.25■■□□□ 1.79
PCNX4Q63HM2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.25■■□□□ 1.79
PCNX4Q63HM2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCNX4Q63HM2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.25■■□□□ 1.79
PCNX4Q63HM2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.25■■□□□ 1.79
PCNX4Q63HM2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCNX4Q63HM2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
PCNX4Q63HM2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCNX4Q63HM2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCNX4Q63HM2 AC008406.3-201ENST00000620001 1374 ntBASIC26.24■■□□□ 1.79
PCNX4Q63HM2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.24■■□□□ 1.79
PCNX4Q63HM2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCNX4Q63HM2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.24■■□□□ 1.79
PCNX4Q63HM2 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.24■■□□□ 1.79
PCNX4Q63HM2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCNX4Q63HM2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.24■■□□□ 1.79
PCNX4Q63HM2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PCNX4Q63HM2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCNX4Q63HM2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
PCNX4Q63HM2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PCNX4Q63HM2 AC022211.4-201ENST00000625094 2161 ntBASIC26.23■■□□□ 1.79
PCNX4Q63HM2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PCNX4Q63HM2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCNX4Q63HM2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
PCNX4Q63HM2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.23■■□□□ 1.79
PCNX4Q63HM2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.23■■□□□ 1.79
PCNX4Q63HM2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
PCNX4Q63HM2 AL356740.2-201ENST00000601559 647 ntBASIC26.23■■□□□ 1.79
PCNX4Q63HM2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
PCNX4Q63HM2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCNX4Q63HM2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCNX4Q63HM2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCNX4Q63HM2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCNX4Q63HM2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.22■■□□□ 1.79
PCNX4Q63HM2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
PCNX4Q63HM2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms