Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
CBWD3Q5JTY5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.2■■□□□ 1.63
CBWD3Q5JTY5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.2■■□□□ 1.63
CBWD3Q5JTY5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CBWD3Q5JTY5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
CBWD3Q5JTY5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
CBWD3Q5JTY5 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CBWD3Q5JTY5 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.2■■□□□ 1.62
CBWD3Q5JTY5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CBWD3Q5JTY5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CBWD3Q5JTY5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CBWD3Q5JTY5 AC022616.5-201ENST00000518796 181 ntBASIC25.19■■□□□ 1.62
CBWD3Q5JTY5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.19■■□□□ 1.62
CBWD3Q5JTY5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CBWD3Q5JTY5 AC004812.2-201ENST00000611079 2094 ntBASIC25.18■■□□□ 1.62
CBWD3Q5JTY5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CBWD3Q5JTY5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.18■■□□□ 1.62
CBWD3Q5JTY5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.18■■□□□ 1.62
CBWD3Q5JTY5 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CBWD3Q5JTY5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CBWD3Q5JTY5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CBWD3Q5JTY5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.17■■□□□ 1.62
CBWD3Q5JTY5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.17■■□□□ 1.62
CBWD3Q5JTY5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
CBWD3Q5JTY5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CBWD3Q5JTY5 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.17■■□□□ 1.62
CBWD3Q5JTY5 AC141586.4-201ENST00000624558 1573 ntBASIC25.17■■□□□ 1.62
CBWD3Q5JTY5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CBWD3Q5JTY5 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CBWD3Q5JTY5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CBWD3Q5JTY5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.16■■□□□ 1.62
CBWD3Q5JTY5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CBWD3Q5JTY5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.16■■□□□ 1.62
CBWD3Q5JTY5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CBWD3Q5JTY5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
CBWD3Q5JTY5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CBWD3Q5JTY5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.15■■□□□ 1.62
CBWD3Q5JTY5 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.15■■□□□ 1.62
CBWD3Q5JTY5 AC011551.1-201ENST00000614101 683 ntBASIC25.15■■□□□ 1.62
CBWD3Q5JTY5 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CBWD3Q5JTY5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CBWD3Q5JTY5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
CBWD3Q5JTY5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.15■■□□□ 1.62
CBWD3Q5JTY5 AC103834.1-201ENST00000520383 144 ntBASIC25.14■■□□□ 1.62
CBWD3Q5JTY5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CBWD3Q5JTY5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
CBWD3Q5JTY5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CBWD3Q5JTY5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CBWD3Q5JTY5 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
CBWD3Q5JTY5 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CBWD3Q5JTY5 AC120024.1-201ENST00000562672 995 ntBASIC25.13■■□□□ 1.61
CBWD3Q5JTY5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CBWD3Q5JTY5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CBWD3Q5JTY5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
CBWD3Q5JTY5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.12■■□□□ 1.61
CBWD3Q5JTY5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CBWD3Q5JTY5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.12■■□□□ 1.61
CBWD3Q5JTY5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.12■■□□□ 1.61
CBWD3Q5JTY5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.12■■□□□ 1.61
CBWD3Q5JTY5 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
CBWD3Q5JTY5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
CBWD3Q5JTY5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CBWD3Q5JTY5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.11■■□□□ 1.61
CBWD3Q5JTY5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CBWD3Q5JTY5 MIR4508-201ENST00000584178 70 ntBASIC25.11■■□□□ 1.61
CBWD3Q5JTY5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.11■■□□□ 1.61
CBWD3Q5JTY5 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CBWD3Q5JTY5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.11■■□□□ 1.61
CBWD3Q5JTY5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.11■■□□□ 1.61
CBWD3Q5JTY5 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CBWD3Q5JTY5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CBWD3Q5JTY5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.1■■□□□ 1.61
CBWD3Q5JTY5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CBWD3Q5JTY5 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CBWD3Q5JTY5 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.1■■□□□ 1.61
CBWD3Q5JTY5 KRT8P33-201ENST00000508125 1423 ntBASIC25.1■■□□□ 1.61
CBWD3Q5JTY5 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CBWD3Q5JTY5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.1■■□□□ 1.61
CBWD3Q5JTY5 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CBWD3Q5JTY5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.09■■□□□ 1.61
CBWD3Q5JTY5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CBWD3Q5JTY5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.09■■□□□ 1.61
CBWD3Q5JTY5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CBWD3Q5JTY5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
CBWD3Q5JTY5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CBWD3Q5JTY5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
CBWD3Q5JTY5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
CBWD3Q5JTY5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
CBWD3Q5JTY5 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.08■■□□□ 1.61
CBWD3Q5JTY5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.08■■□□□ 1.61
CBWD3Q5JTY5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CBWD3Q5JTY5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.07■■□□□ 1.6
CBWD3Q5JTY5 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CBWD3Q5JTY5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
CBWD3Q5JTY5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CBWD3Q5JTY5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.07■■□□□ 1.6
CBWD3Q5JTY5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CBWD3Q5JTY5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CBWD3Q5JTY5 ABCB10P4-201ENST00000566803 2184 ntBASIC25.07■■□□□ 1.6
CBWD3Q5JTY5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms