Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.79■■□□□ 1.72
TRIM60Q495X7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TRIM60Q495X7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.78■■□□□ 1.72
TRIM60Q495X7 SERBP1P1-201ENST00000396021 1160 ntBASIC25.78■■□□□ 1.72
TRIM60Q495X7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.78■■□□□ 1.72
TRIM60Q495X7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TRIM60Q495X7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
TRIM60Q495X7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
TRIM60Q495X7 AC092171.4-201ENST00000609130 632 ntBASIC25.77■■□□□ 1.72
TRIM60Q495X7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
TRIM60Q495X7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.77■■□□□ 1.72
TRIM60Q495X7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.77■■□□□ 1.72
TRIM60Q495X7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.77■■□□□ 1.72
TRIM60Q495X7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRIM60Q495X7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.76■■□□□ 1.71
TRIM60Q495X7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TRIM60Q495X7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRIM60Q495X7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.76■■□□□ 1.71
TRIM60Q495X7 AC027682.1-201ENST00000562846 899 ntBASIC25.76■■□□□ 1.71
TRIM60Q495X7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.76■■□□□ 1.71
TRIM60Q495X7 AC005703.6-201ENST00000623265 1329 ntBASIC25.76■■□□□ 1.71
TRIM60Q495X7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.76■■□□□ 1.71
TRIM60Q495X7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRIM60Q495X7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRIM60Q495X7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.76■■□□□ 1.71
TRIM60Q495X7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TRIM60Q495X7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC25.75■■□□□ 1.71
TRIM60Q495X7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRIM60Q495X7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRIM60Q495X7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRIM60Q495X7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
TRIM60Q495X7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.74■■□□□ 1.71
TRIM60Q495X7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
TRIM60Q495X7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.74■■□□□ 1.71
TRIM60Q495X7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRIM60Q495X7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRIM60Q495X7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
TRIM60Q495X7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
TRIM60Q495X7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRIM60Q495X7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRIM60Q495X7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
TRIM60Q495X7 IRS3P-201ENST00000223076 1006 ntBASIC25.73■■□□□ 1.71
TRIM60Q495X7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRIM60Q495X7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRIM60Q495X7 AC008764.7-201ENST00000593779 1081 ntBASIC25.73■■□□□ 1.71
TRIM60Q495X7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.73■■□□□ 1.71
TRIM60Q495X7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
TRIM60Q495X7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRIM60Q495X7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.72■■□□□ 1.71
TRIM60Q495X7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.72■■□□□ 1.71
TRIM60Q495X7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.71■■□□□ 1.71
TRIM60Q495X7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRIM60Q495X7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.71■■□□□ 1.71
TRIM60Q495X7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.71■■□□□ 1.71
TRIM60Q495X7 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.71■■□□□ 1.71
TRIM60Q495X7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.71■■□□□ 1.71
TRIM60Q495X7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TRIM60Q495X7 AC090192.1-201ENST00000517740 490 ntBASIC25.71■■□□□ 1.71
TRIM60Q495X7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.71
TRIM60Q495X7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TRIM60Q495X7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TRIM60Q495X7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
TRIM60Q495X7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.7■■□□□ 1.7
TRIM60Q495X7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.7■■□□□ 1.7
TRIM60Q495X7 AC099791.2-201ENST00000605725 427 ntBASIC25.7■■□□□ 1.7
TRIM60Q495X7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TRIM60Q495X7 AC099791.1-201ENST00000416440 715 ntBASIC25.69■■□□□ 1.7
TRIM60Q495X7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.69■■□□□ 1.7
TRIM60Q495X7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.69■■□□□ 1.7
TRIM60Q495X7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.69■■□□□ 1.7
TRIM60Q495X7 RARRES2P11-201ENST00000635158 484 ntBASIC25.69■■□□□ 1.7
TRIM60Q495X7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
TRIM60Q495X7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TRIM60Q495X7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
TRIM60Q495X7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
TRIM60Q495X7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
TRIM60Q495X7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
TRIM60Q495X7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
TRIM60Q495X7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.68■■□□□ 1.7
TRIM60Q495X7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.68■■□□□ 1.7
TRIM60Q495X7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TRIM60Q495X7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
TRIM60Q495X7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
TRIM60Q495X7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TRIM60Q495X7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
TRIM60Q495X7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TRIM60Q495X7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.67■■□□□ 1.7
TRIM60Q495X7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.67■■□□□ 1.7
TRIM60Q495X7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.67■■□□□ 1.7
TRIM60Q495X7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TRIM60Q495X7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TRIM60Q495X7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.66■■□□□ 1.7
TRIM60Q495X7 AC011298.3-201ENST00000615796 283 ntBASIC25.66■■□□□ 1.7
TRIM60Q495X7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TRIM60Q495X7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TRIM60Q495X7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TRIM60Q495X7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM60Q495X7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM60Q495X7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM60Q495X7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms