Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 EP400NL-214ENST00000641289 2402 ntBASIC21.16■□□□□ 0.98
CXCR4P61073 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CXCR4P61073 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CXCR4P61073 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CXCR4P61073 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.16■□□□□ 0.98
CXCR4P61073 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CXCR4P61073 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CXCR4P61073 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.16■□□□□ 0.98
CXCR4P61073 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CXCR4P61073 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CXCR4P61073 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CXCR4P61073 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CXCR4P61073 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CXCR4P61073 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CXCR4P61073 HLA-L-211ENST00000482052 1765 ntBASIC21.15■□□□□ 0.98
CXCR4P61073 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CXCR4P61073 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CXCR4P61073 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CXCR4P61073 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CXCR4P61073 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.15■□□□□ 0.98
CXCR4P61073 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CXCR4P61073 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CXCR4P61073 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CXCR4P61073 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CXCR4P61073 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CXCR4P61073 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.14■□□□□ 0.97
CXCR4P61073 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.14■□□□□ 0.97
CXCR4P61073 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CXCR4P61073 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CXCR4P61073 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.13■□□□□ 0.97
CXCR4P61073 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
CXCR4P61073 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CXCR4P61073 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.13■□□□□ 0.97
CXCR4P61073 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
CXCR4P61073 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CXCR4P61073 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CXCR4P61073 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CXCR4P61073 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CXCR4P61073 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CXCR4P61073 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CXCR4P61073 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.11■□□□□ 0.97
CXCR4P61073 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CXCR4P61073 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CXCR4P61073 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CXCR4P61073 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CXCR4P61073 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CXCR4P61073 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CXCR4P61073 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CXCR4P61073 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CXCR4P61073 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CXCR4P61073 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.1■□□□□ 0.97
CXCR4P61073 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CXCR4P61073 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CXCR4P61073 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CXCR4P61073 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CXCR4P61073 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
CXCR4P61073 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CXCR4P61073 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CXCR4P61073 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CXCR4P61073 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CXCR4P61073 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CXCR4P61073 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CXCR4P61073 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CXCR4P61073 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CXCR4P61073 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CXCR4P61073 AC127496.7-201ENST00000625110 1798 ntBASIC21.08■□□□□ 0.97
CXCR4P61073 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CXCR4P61073 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CXCR4P61073 MIR3648-2-201ENST00000581792 180 ntBASIC21.08■□□□□ 0.97
CXCR4P61073 MIR3648-1-201ENST00000615959 180 ntBASIC21.08■□□□□ 0.97
CXCR4P61073 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CXCR4P61073 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
CXCR4P61073 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CXCR4P61073 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CXCR4P61073 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CXCR4P61073 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.08■□□□□ 0.96
CXCR4P61073 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CXCR4P61073 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CXCR4P61073 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CXCR4P61073 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CXCR4P61073 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CXCR4P61073 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.07■□□□□ 0.96
CXCR4P61073 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.07■□□□□ 0.96
CXCR4P61073 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.07■□□□□ 0.96
CXCR4P61073 AC137767.1-201ENST00000602918 1920 ntBASIC21.07■□□□□ 0.96
CXCR4P61073 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CXCR4P61073 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CXCR4P61073 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CXCR4P61073 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.06■□□□□ 0.96
CXCR4P61073 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CXCR4P61073 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CXCR4P61073 ABHD17AP4-201ENST00000411545 909 ntBASIC21.06■□□□□ 0.96
CXCR4P61073 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CXCR4P61073 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.06■□□□□ 0.96
CXCR4P61073 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CXCR4P61073 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CXCR4P61073 LINC00526-201ENST00000581067 1875 ntBASIC21.06■□□□□ 0.96
CXCR4P61073 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CXCR4P61073 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CXCR4P61073 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms