Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RIPK4P57078 AC142381.3-201ENST00000568208 1670 ntBASIC30.57■■■□□ 2.48
RIPK4P57078 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
RIPK4P57078 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RIPK4P57078 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RIPK4P57078 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
RIPK4P57078 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
RIPK4P57078 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
RIPK4P57078 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC30.56■■■□□ 2.48
RIPK4P57078 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
RIPK4P57078 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RIPK4P57078 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.56■■■□□ 2.48
RIPK4P57078 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
RIPK4P57078 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RIPK4P57078 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC30.56■■■□□ 2.48
RIPK4P57078 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
RIPK4P57078 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
RIPK4P57078 TK2-202ENST00000417693 1046 ntTSL 2 BASIC30.55■■■□□ 2.48
RIPK4P57078 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
RIPK4P57078 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RIPK4P57078 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RIPK4P57078 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC30.54■■■□□ 2.48
RIPK4P57078 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC30.54■■■□□ 2.48
RIPK4P57078 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RIPK4P57078 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
RIPK4P57078 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RIPK4P57078 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RIPK4P57078 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
RIPK4P57078 AC092028.1-203ENST00000608262 953 ntBASIC30.53■■■□□ 2.48
RIPK4P57078 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RIPK4P57078 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
RIPK4P57078 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RIPK4P57078 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
RIPK4P57078 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RIPK4P57078 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC30.52■■■□□ 2.48
RIPK4P57078 LBH-205ENST00000407930 756 ntTSL 2 BASIC30.52■■■□□ 2.48
RIPK4P57078 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.52■■■□□ 2.48
RIPK4P57078 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RIPK4P57078 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RIPK4P57078 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
RIPK4P57078 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
RIPK4P57078 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC30.51■■■□□ 2.47
RIPK4P57078 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
RIPK4P57078 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
RIPK4P57078 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC30.51■■■□□ 2.47
RIPK4P57078 AP003733.4-201ENST00000623785 1697 ntBASIC30.5■■■□□ 2.47
RIPK4P57078 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RIPK4P57078 UNC93B8-201ENST00000511903 705 ntBASIC30.5■■■□□ 2.47
RIPK4P57078 HLA-L-211ENST00000482052 1765 ntBASIC30.5■■■□□ 2.47
RIPK4P57078 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
RIPK4P57078 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
RIPK4P57078 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC30.49■■■□□ 2.47
RIPK4P57078 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC30.49■■■□□ 2.47
RIPK4P57078 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RIPK4P57078 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC30.49■■■□□ 2.47
RIPK4P57078 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.49■■■□□ 2.47
RIPK4P57078 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
RIPK4P57078 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.48■■■□□ 2.47
RIPK4P57078 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC30.48■■■□□ 2.47
RIPK4P57078 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
RIPK4P57078 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
RIPK4P57078 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
RIPK4P57078 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC30.47■■■□□ 2.47
RIPK4P57078 TSPY9P-201ENST00000440215 945 ntBASIC30.47■■■□□ 2.47
RIPK4P57078 TSPY11P-201ENST00000442607 1045 ntBASIC30.47■■■□□ 2.47
RIPK4P57078 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.47■■■□□ 2.47
RIPK4P57078 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC30.46■■■□□ 2.47
RIPK4P57078 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.46■■■□□ 2.47
RIPK4P57078 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
RIPK4P57078 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
RIPK4P57078 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
RIPK4P57078 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC30.46■■■□□ 2.47
RIPK4P57078 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
RIPK4P57078 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC30.46■■■□□ 2.47
RIPK4P57078 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
RIPK4P57078 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
RIPK4P57078 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC30.45■■■□□ 2.47
RIPK4P57078 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
RIPK4P57078 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC30.45■■■□□ 2.47
RIPK4P57078 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC30.45■■■□□ 2.46
RIPK4P57078 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
RIPK4P57078 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RIPK4P57078 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.44■■■□□ 2.46
RIPK4P57078 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.44■■■□□ 2.46
RIPK4P57078 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.44■■■□□ 2.46
RIPK4P57078 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
RIPK4P57078 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
RIPK4P57078 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC30.44■■■□□ 2.46
RIPK4P57078 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RIPK4P57078 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC30.43■■■□□ 2.46
RIPK4P57078 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC30.43■■■□□ 2.46
RIPK4P57078 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC30.43■■■□□ 2.46
RIPK4P57078 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.43■■■□□ 2.46
RIPK4P57078 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.43■■■□□ 2.46
RIPK4P57078 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.43■■■□□ 2.46
RIPK4P57078 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
RIPK4P57078 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
RIPK4P57078 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
RIPK4P57078 AL356441.2-201ENST00000443009 864 ntBASIC30.42■■■□□ 2.46
RIPK4P57078 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC30.42■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms