Protein–RNA interactions for Protein: P55774

CCL18, C-C motif chemokine 18, humanhuman

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL18P55774 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL18P55774 ERN1-208ENST00000606895 2068 ntBASIC16.27■□□□□ 0.2
CCL18P55774 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL18P55774 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCL18P55774 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCL18P55774 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCL18P55774 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CCL18P55774 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL18P55774 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CCL18P55774 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.27■□□□□ 0.2
CCL18P55774 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL18P55774 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL18P55774 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCL18P55774 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL18P55774 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CCL18P55774 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCL18P55774 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL18P55774 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL18P55774 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.26■□□□□ 0.19
CCL18P55774 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL18P55774 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC16.26■□□□□ 0.19
CCL18P55774 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL18P55774 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCL18P55774 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CCL18P55774 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL18P55774 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL18P55774 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL18P55774 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CCL18P55774 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.25■□□□□ 0.19
CCL18P55774 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.25■□□□□ 0.19
CCL18P55774 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.25■□□□□ 0.19
CCL18P55774 AC137630.3-201ENST00000607245 391 ntBASIC16.25■□□□□ 0.19
CCL18P55774 MIR4787-201ENST00000607364 84 ntBASIC16.25■□□□□ 0.19
CCL18P55774 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.25■□□□□ 0.19
CCL18P55774 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL18P55774 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL18P55774 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL18P55774 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL18P55774 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL18P55774 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL18P55774 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL18P55774 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL18P55774 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CCL18P55774 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL18P55774 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCL18P55774 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL18P55774 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL18P55774 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.24■□□□□ 0.19
CCL18P55774 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.24■□□□□ 0.19
CCL18P55774 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL18P55774 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL18P55774 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL18P55774 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL18P55774 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CCL18P55774 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.23■□□□□ 0.19
CCL18P55774 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL18P55774 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL18P55774 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCL18P55774 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.23■□□□□ 0.19
CCL18P55774 AC096887.2-201ENST00000623443 1957 ntBASIC16.23■□□□□ 0.19
CCL18P55774 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.23■□□□□ 0.19
CCL18P55774 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCL18P55774 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCL18P55774 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL18P55774 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCL18P55774 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.22■□□□□ 0.19
CCL18P55774 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL18P55774 MIR4281-201ENST00000580852 62 ntBASIC16.22■□□□□ 0.19
CCL18P55774 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.22■□□□□ 0.19
CCL18P55774 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL18P55774 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL18P55774 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL18P55774 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.21■□□□□ 0.19
CCL18P55774 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL18P55774 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL18P55774 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL18P55774 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CCL18P55774 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL18P55774 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCL18P55774 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL18P55774 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.21■□□□□ 0.19
CCL18P55774 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.21■□□□□ 0.18
CCL18P55774 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCL18P55774 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CCL18P55774 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL18P55774 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL18P55774 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.2■□□□□ 0.18
CCL18P55774 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL18P55774 AC131212.1-201ENST00000613771 668 ntBASIC16.2■□□□□ 0.18
CCL18P55774 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCL18P55774 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL18P55774 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL18P55774 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL18P55774 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCL18P55774 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCL18P55774 AC021242.3-201ENST00000607598 1377 ntBASIC16.19■□□□□ 0.18
CCL18P55774 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.19■□□□□ 0.18
CCL18P55774 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CCL18P55774 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCL18P55774 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms