Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDH4P55283 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDH4P55283 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDH4P55283 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.86■■□□□ 1.41
CDH4P55283 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.86■■□□□ 1.41
CDH4P55283 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDH4P55283 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.85■■□□□ 1.41
CDH4P55283 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.85■■□□□ 1.41
CDH4P55283 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDH4P55283 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.85■■□□□ 1.41
CDH4P55283 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDH4P55283 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDH4P55283 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDH4P55283 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.84■■□□□ 1.41
CDH4P55283 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH4P55283 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH4P55283 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH4P55283 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.84■■□□□ 1.41
CDH4P55283 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH4P55283 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CDH4P55283 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.84■■□□□ 1.41
CDH4P55283 AC092028.1-203ENST00000608262 953 ntBASIC23.84■■□□□ 1.41
CDH4P55283 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH4P55283 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.84■■□□□ 1.41
CDH4P55283 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH4P55283 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDH4P55283 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDH4P55283 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDH4P55283 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDH4P55283 AC138932.3-201ENST00000567634 1902 ntBASIC23.82■■□□□ 1.4
CDH4P55283 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDH4P55283 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDH4P55283 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.82■■□□□ 1.4
CDH4P55283 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDH4P55283 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDH4P55283 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.81■■□□□ 1.4
CDH4P55283 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.81■■□□□ 1.4
CDH4P55283 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CDH4P55283 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.81■■□□□ 1.4
CDH4P55283 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDH4P55283 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH4P55283 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDH4P55283 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.8■■□□□ 1.4
CDH4P55283 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.8■■□□□ 1.4
CDH4P55283 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDH4P55283 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH4P55283 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH4P55283 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH4P55283 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.8■■□□□ 1.4
CDH4P55283 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CDH4P55283 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.8■■□□□ 1.4
CDH4P55283 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.8■■□□□ 1.4
CDH4P55283 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDH4P55283 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.79■■□□□ 1.4
CDH4P55283 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.79■■□□□ 1.4
CDH4P55283 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CDH4P55283 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.79■■□□□ 1.4
CDH4P55283 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDH4P55283 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CDH4P55283 HLA-L-211ENST00000482052 1765 ntBASIC23.78■■□□□ 1.4
CDH4P55283 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.78■■□□□ 1.4
CDH4P55283 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.78■■□□□ 1.4
CDH4P55283 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CDH4P55283 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDH4P55283 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDH4P55283 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
CDH4P55283 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDH4P55283 TSPY9P-201ENST00000440215 945 ntBASIC23.77■■□□□ 1.4
CDH4P55283 TSPY11P-201ENST00000442607 1045 ntBASIC23.77■■□□□ 1.4
CDH4P55283 UNC93B8-201ENST00000511903 705 ntBASIC23.77■■□□□ 1.4
CDH4P55283 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.77■■□□□ 1.4
CDH4P55283 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.77■■□□□ 1.4
CDH4P55283 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDH4P55283 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
CDH4P55283 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDH4P55283 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDH4P55283 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDH4P55283 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CDH4P55283 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.76■■□□□ 1.39
CDH4P55283 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.76■■□□□ 1.39
CDH4P55283 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CDH4P55283 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH4P55283 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH4P55283 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
CDH4P55283 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH4P55283 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.75■■□□□ 1.39
CDH4P55283 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.75■■□□□ 1.39
CDH4P55283 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.75■■□□□ 1.39
CDH4P55283 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.75■■□□□ 1.39
CDH4P55283 SNX5-217ENST00000606557 1087 ntBASIC23.75■■□□□ 1.39
CDH4P55283 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CDH4P55283 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.75■■□□□ 1.39
CDH4P55283 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CDH4P55283 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CDH4P55283 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDH4P55283 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.74■■□□□ 1.39
CDH4P55283 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.74■■□□□ 1.39
CDH4P55283 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.74■■□□□ 1.39
CDH4P55283 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDH4P55283 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms