Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 ATH1YPR026W 3636 nt4.68□□□□□ -1.66
UFD1P53044 DAL81YIR023W 2913 nt4.68□□□□□ -1.66
UFD1P53044 GCS1YDL226C 1059 nt4.67□□□□□ -1.66
UFD1P53044 YGR022CYGR022C 330 nt4.67□□□□□ -1.66
UFD1P53044 VMA16YHR026W 642 nt4.67□□□□□ -1.66
UFD1P53044 REV7YIL139C 738 nt4.67□□□□□ -1.66
UFD1P53044 LST8YNL006W 912 nt4.67□□□□□ -1.66
UFD1P53044 GRE1YPL223C 507 nt4.67□□□□□ -1.66
UFD1P53044 UBC4YBR082C 447 nt4.67□□□□□ -1.66
UFD1P53044 MSC7YHR039C 1935 nt4.66□□□□□ -1.66
UFD1P53044 BRF1YGR246C 1791 nt4.66□□□□□ -1.66
UFD1P53044 DON1YDR273W 1098 nt4.66□□□□□ -1.66
UFD1P53044 tN(GUU)CtN(GUU)C 74 nt4.66□□□□□ -1.66
UFD1P53044 tN(GUU)FtN(GUU)F 74 nt4.66□□□□□ -1.66
UFD1P53044 tN(GUU)GtN(GUU)G 74 nt4.66□□□□□ -1.66
UFD1P53044 tN(GUU)KtN(GUU)K 74 nt4.66□□□□□ -1.66
UFD1P53044 tN(GUU)LtN(GUU)L 74 nt4.66□□□□□ -1.66
UFD1P53044 tN(GUU)N1tN(GUU)N1 74 nt4.66□□□□□ -1.66
UFD1P53044 tN(GUU)N2tN(GUU)N2 74 nt4.66□□□□□ -1.66
UFD1P53044 tN(GUU)O1tN(GUU)O1 74 nt4.66□□□□□ -1.66
UFD1P53044 tN(GUU)O2tN(GUU)O2 74 nt4.66□□□□□ -1.66
UFD1P53044 tN(GUU)PtN(GUU)P 74 nt4.66□□□□□ -1.66
UFD1P53044 CSM2YIL132C 642 nt4.66□□□□□ -1.66
UFD1P53044 YPR195CYPR195C 330 nt4.66□□□□□ -1.66
UFD1P53044 ARR3YPR201W 1215 nt4.66□□□□□ -1.66
UFD1P53044 DED81YHR019C 1665 nt4.66□□□□□ -1.66
UFD1P53044 HES1YOR237W 1305 nt4.66□□□□□ -1.66
UFD1P53044 PAP1YKR002W 1707 nt4.66□□□□□ -1.66
UFD1P53044 SYG1YIL047C 2709 nt4.66□□□□□ -1.66
UFD1P53044 ATG23YLR431C 1362 nt4.65□□□□□ -1.66
UFD1P53044 RPT1YKL145W 1404 nt4.65□□□□□ -1.66
UFD1P53044 SEC18YBR080C 2277 nt4.65□□□□□ -1.66
UFD1P53044 GEP3YOR205C 1671 nt4.65□□□□□ -1.66
UFD1P53044 COX26YDR119W-A 201 nt4.65□□□□□ -1.67
UFD1P53044 RPR2YIR015W 435 nt4.65□□□□□ -1.67
UFD1P53044 MND2YIR025W 1107 nt4.65□□□□□ -1.67
UFD1P53044 MRPL36YBR122C 534 nt4.65□□□□□ -1.67
UFD1P53044 HRP1YOL123W 1605 nt4.64□□□□□ -1.67
UFD1P53044 BIT2YBR270C 1638 nt4.64□□□□□ -1.67
UFD1P53044 SFI1YLL003W 2841 nt4.64□□□□□ -1.67
UFD1P53044 SLT2YHR030C 1455 nt4.64□□□□□ -1.67
UFD1P53044 FUM1YPL262W 1467 nt4.64□□□□□ -1.67
UFD1P53044 CPS1YJL172W 1731 nt4.64□□□□□ -1.67
UFD1P53044 LUC7YDL087C 786 nt4.64□□□□□ -1.67
UFD1P53044 AI5_BETAQ0075 1065 nt4.64□□□□□ -1.67
UFD1P53044 PDE1YGL248W 1110 nt4.64□□□□□ -1.67
UFD1P53044 YIR017W-AYIR017W-A 600 nt4.64□□□□□ -1.67
UFD1P53044 SSP120YLR250W 705 nt4.64□□□□□ -1.67
UFD1P53044 YNR075C-AYNR075C-A 93 nt4.64□□□□□ -1.67
UFD1P53044 NUD1YOR373W 2556 nt4.63□□□□□ -1.67
UFD1P53044 CDC4YFL009W 2340 nt4.63□□□□□ -1.67
UFD1P53044 YGR125WYGR125W 3111 nt4.63□□□□□ -1.67
UFD1P53044 SCS2YER120W 735 nt4.63□□□□□ -1.67
UFD1P53044 SLD7YOR060C 774 nt4.63□□□□□ -1.67
UFD1P53044 STE50YCL032W 1041 nt4.63□□□□□ -1.67
UFD1P53044 VMA13YPR036W 1437 nt4.63□□□□□ -1.67
UFD1P53044 SIF2YBR103W 1608 nt4.62□□□□□ -1.67
UFD1P53044 FAA3YIL009W 2085 nt4.62□□□□□ -1.67
UFD1P53044 RHB1YCR027C 630 nt4.62□□□□□ -1.67
UFD1P53044 GIR2YDR152W 798 nt4.62□□□□□ -1.67
UFD1P53044 URA3YEL021W 804 nt4.62□□□□□ -1.67
UFD1P53044 LCP5YER127W 1074 nt4.62□□□□□ -1.67
UFD1P53044 HSX1tR(CCU)J 72 nt4.62□□□□□ -1.67
UFD1P53044 YKL107WYKL107W 930 nt4.62□□□□□ -1.67
UFD1P53044 TFS1YLR178C 660 nt4.62□□□□□ -1.67
UFD1P53044 VHS2YIL135C 1311 nt4.62□□□□□ -1.67
UFD1P53044 DAK1YML070W 1755 nt4.62□□□□□ -1.67
UFD1P53044 ATG7YHR171W 1893 nt4.61□□□□□ -1.67
UFD1P53044 YDL034WYDL034W 345 nt4.61□□□□□ -1.67
UFD1P53044 PGU1YJR153W 1086 nt4.61□□□□□ -1.67
UFD1P53044 NGR1YBR212W 2019 nt4.61□□□□□ -1.67
UFD1P53044 DNF2YDR093W 4839 nt4.61□□□□□ -1.67
UFD1P53044 UBP9YER098W 2265 nt4.61□□□□□ -1.67
UFD1P53044 MSS116YDR194C 1995 nt4.6□□□□□ -1.67
UFD1P53044 YCR097W-AYCR097W-A 267 nt4.6□□□□□ -1.67
UFD1P53044 MRP17YKL003C 396 nt4.6□□□□□ -1.67
UFD1P53044 COS9YKL219W 1224 nt4.6□□□□□ -1.67
UFD1P53044 YLL059CYLL059C 507 nt4.6□□□□□ -1.67
UFD1P53044 YHR045WYHR045W 1683 nt4.6□□□□□ -1.67
UFD1P53044 APL6YGR261C 2430 nt4.6□□□□□ -1.67
UFD1P53044 QRI1YDL103C 1434 nt4.59□□□□□ -1.67
UFD1P53044 CAD1YDR423C 1230 nt4.59□□□□□ -1.67
UFD1P53044 ARN1YHL040C 1884 nt4.59□□□□□ -1.67
UFD1P53044 QDR1YIL120W 1692 nt4.59□□□□□ -1.67
UFD1P53044 YLR346CYLR346C 306 nt4.59□□□□□ -1.67
UFD1P53044 PZF1YPR186C 1290 nt4.59□□□□□ -1.67
UFD1P53044 RAD16YBR114W 2373 nt4.59□□□□□ -1.67
UFD1P53044 SPC97YHR172W 2472 nt4.58□□□□□ -1.68
UFD1P53044 PDI1YCL043C 1569 nt4.58□□□□□ -1.68
UFD1P53044 YHR145CYHR145C 357 nt4.58□□□□□ -1.68
UFD1P53044 RPS19BYNL302C 435 nt4.58□□□□□ -1.68
UFD1P53044 DAL82YNL314W 768 nt4.58□□□□□ -1.68
UFD1P53044 LEM3YNL323W 1245 nt4.58□□□□□ -1.68
UFD1P53044 YBR230W-AYBR230W-A 201 nt4.58□□□□□ -1.68
UFD1P53044 VPS72YDR485C 2388 nt4.58□□□□□ -1.68
UFD1P53044 DPB2YPR175W 2070 nt4.58□□□□□ -1.68
UFD1P53044 PCA1YBR295W 3651 nt4.58□□□□□ -1.68
UFD1P53044 YER187WYER187W 426 nt4.57□□□□□ -1.68
UFD1P53044 YJL107CYJL107C 1164 nt4.57□□□□□ -1.68
UFD1P53044 DCN1YLR128W 810 nt4.57□□□□□ -1.68
Retrieved 100 of 7,029 protein–RNA pairs in 19.1 ms