Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
PDX1P52945 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PDX1P52945 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDX1P52945 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDX1P52945 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.57■■□□□ 1.2
PDX1P52945 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.57■■□□□ 1.2
PDX1P52945 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.57■■□□□ 1.2
PDX1P52945 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDX1P52945 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDX1P52945 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDX1P52945 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDX1P52945 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
PDX1P52945 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDX1P52945 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDX1P52945 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDX1P52945 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PDX1P52945 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.56■■□□□ 1.2
PDX1P52945 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.56■■□□□ 1.2
PDX1P52945 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PDX1P52945 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDX1P52945 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDX1P52945 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDX1P52945 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDX1P52945 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDX1P52945 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDX1P52945 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDX1P52945 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDX1P52945 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDX1P52945 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PDX1P52945 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PDX1P52945 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PDX1P52945 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDX1P52945 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.54■■□□□ 1.2
PDX1P52945 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PDX1P52945 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDX1P52945 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PDX1P52945 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDX1P52945 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDX1P52945 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.53■■□□□ 1.2
PDX1P52945 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDX1P52945 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDX1P52945 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PDX1P52945 AC010501.1-201ENST00000606270 1962 ntBASIC22.52■■□□□ 1.2
PDX1P52945 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.52■■□□□ 1.2
PDX1P52945 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDX1P52945 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDX1P52945 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.52■■□□□ 1.2
PDX1P52945 AC005837.3-201ENST00000612163 286 ntBASIC22.52■■□□□ 1.2
PDX1P52945 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDX1P52945 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PDX1P52945 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.51■■□□□ 1.19
PDX1P52945 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDX1P52945 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDX1P52945 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDX1P52945 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.51■■□□□ 1.19
PDX1P52945 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.51■■□□□ 1.19
PDX1P52945 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDX1P52945 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.51■■□□□ 1.19
PDX1P52945 SNX5-217ENST00000606557 1087 ntBASIC22.51■■□□□ 1.19
PDX1P52945 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDX1P52945 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDX1P52945 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDX1P52945 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.5■■□□□ 1.19
PDX1P52945 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDX1P52945 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDX1P52945 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDX1P52945 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDX1P52945 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDX1P52945 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDX1P52945 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.5■■□□□ 1.19
PDX1P52945 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDX1P52945 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.5■■□□□ 1.19
PDX1P52945 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
PDX1P52945 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.5■■□□□ 1.19
PDX1P52945 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDX1P52945 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDX1P52945 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.49■■□□□ 1.19
PDX1P52945 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDX1P52945 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDX1P52945 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.48■■□□□ 1.19
PDX1P52945 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.48■■□□□ 1.19
PDX1P52945 AC090877.2-201ENST00000558441 1738 ntBASIC22.48■■□□□ 1.19
PDX1P52945 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PDX1P52945 AC020928.2-201ENST00000588717 2197 ntBASIC22.48■■□□□ 1.19
PDX1P52945 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
PDX1P52945 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDX1P52945 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.47■■□□□ 1.19
PDX1P52945 AC133561.4-201ENST00000566112 224 ntBASIC22.47■■□□□ 1.19
PDX1P52945 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDX1P52945 AC096887.2-201ENST00000623443 1957 ntBASIC22.47■■□□□ 1.19
PDX1P52945 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDX1P52945 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDX1P52945 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
PDX1P52945 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.46■■□□□ 1.19
PDX1P52945 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
PDX1P52945 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.46■■□□□ 1.19
PDX1P52945 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
PDX1P52945 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
PDX1P52945 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.45■■□□□ 1.18
PDX1P52945 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms