Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CLCNKAP51800 AC022211.4-201ENST00000625094 2161 ntBASIC22.82■■□□□ 1.24
CLCNKAP51800 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CLCNKAP51800 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CLCNKAP51800 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.81■■□□□ 1.24
CLCNKAP51800 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CLCNKAP51800 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
CLCNKAP51800 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.81■■□□□ 1.24
CLCNKAP51800 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.81■■□□□ 1.24
CLCNKAP51800 UNC93B8-201ENST00000511903 705 ntBASIC22.81■■□□□ 1.24
CLCNKAP51800 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CLCNKAP51800 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CLCNKAP51800 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
CLCNKAP51800 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CLCNKAP51800 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CLCNKAP51800 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CLCNKAP51800 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.8■■□□□ 1.24
CLCNKAP51800 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.8■■□□□ 1.24
CLCNKAP51800 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.8■■□□□ 1.24
CLCNKAP51800 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CLCNKAP51800 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.8■■□□□ 1.24
CLCNKAP51800 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CLCNKAP51800 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CLCNKAP51800 AC020928.2-201ENST00000588717 2197 ntBASIC22.79■■□□□ 1.24
CLCNKAP51800 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CLCNKAP51800 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CLCNKAP51800 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.79■■□□□ 1.24
CLCNKAP51800 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.79■■□□□ 1.24
CLCNKAP51800 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.79■■□□□ 1.24
CLCNKAP51800 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.79■■□□□ 1.24
CLCNKAP51800 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CLCNKAP51800 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
CLCNKAP51800 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CLCNKAP51800 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
CLCNKAP51800 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.78■■□□□ 1.24
CLCNKAP51800 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CLCNKAP51800 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.78■■□□□ 1.24
CLCNKAP51800 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.78■■□□□ 1.24
CLCNKAP51800 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CLCNKAP51800 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CLCNKAP51800 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.77■■□□□ 1.24
CLCNKAP51800 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.77■■□□□ 1.24
CLCNKAP51800 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CLCNKAP51800 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
CLCNKAP51800 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.77■■□□□ 1.24
CLCNKAP51800 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CLCNKAP51800 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CLCNKAP51800 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
CLCNKAP51800 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.76■■□□□ 1.23
CLCNKAP51800 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
CLCNKAP51800 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.76■■□□□ 1.23
CLCNKAP51800 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CLCNKAP51800 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.76■■□□□ 1.23
CLCNKAP51800 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CLCNKAP51800 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CLCNKAP51800 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.75■■□□□ 1.23
CLCNKAP51800 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.75■■□□□ 1.23
CLCNKAP51800 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CLCNKAP51800 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
CLCNKAP51800 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CLCNKAP51800 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.75■■□□□ 1.23
CLCNKAP51800 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CLCNKAP51800 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CLCNKAP51800 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
CLCNKAP51800 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CLCNKAP51800 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
CLCNKAP51800 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CLCNKAP51800 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.74■■□□□ 1.23
CLCNKAP51800 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.74■■□□□ 1.23
CLCNKAP51800 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.74■■□□□ 1.23
CLCNKAP51800 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CLCNKAP51800 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CLCNKAP51800 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CLCNKAP51800 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CLCNKAP51800 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.73■■□□□ 1.23
CLCNKAP51800 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CLCNKAP51800 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.73■■□□□ 1.23
CLCNKAP51800 KRT16P3-201ENST00000439127 1283 ntBASIC22.73■■□□□ 1.23
CLCNKAP51800 TSPY9P-201ENST00000440215 945 ntBASIC22.73■■□□□ 1.23
CLCNKAP51800 TSPY11P-201ENST00000442607 1045 ntBASIC22.73■■□□□ 1.23
CLCNKAP51800 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CLCNKAP51800 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CLCNKAP51800 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CLCNKAP51800 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CLCNKAP51800 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CLCNKAP51800 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.72■■□□□ 1.23
CLCNKAP51800 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
CLCNKAP51800 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.72■■□□□ 1.23
CLCNKAP51800 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CLCNKAP51800 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.71■■□□□ 1.23
CLCNKAP51800 SNX5-217ENST00000606557 1087 ntBASIC22.71■■□□□ 1.23
CLCNKAP51800 AC010997.5-201ENST00000609182 354 ntBASIC22.71■■□□□ 1.23
CLCNKAP51800 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.71■■□□□ 1.23
CLCNKAP51800 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CLCNKAP51800 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.71■■□□□ 1.23
CLCNKAP51800 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CLCNKAP51800 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CLCNKAP51800 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.7■■□□□ 1.23
CLCNKAP51800 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CLCNKAP51800 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.7■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms