Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.37■■□□□ 1.01
SSR4P51571 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.37■■□□□ 1.01
SSR4P51571 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SSR4P51571 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.37■■□□□ 1.01
SSR4P51571 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.37■■□□□ 1.01
SSR4P51571 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.37■■□□□ 1.01
SSR4P51571 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SSR4P51571 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SSR4P51571 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.36■■□□□ 1.01
SSR4P51571 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SSR4P51571 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SSR4P51571 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.36■■□□□ 1.01
SSR4P51571 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SSR4P51571 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SSR4P51571 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SSR4P51571 SNX5-217ENST00000606557 1087 ntBASIC21.35■■□□□ 1.01
SSR4P51571 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.35■■□□□ 1.01
SSR4P51571 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SSR4P51571 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SSR4P51571 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SSR4P51571 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SSR4P51571 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SSR4P51571 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SSR4P51571 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.34■■□□□ 1.01
SSR4P51571 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SSR4P51571 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SSR4P51571 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.33■■□□□ 1.01
SSR4P51571 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SSR4P51571 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.33■■□□□ 1.01
SSR4P51571 MIR6724-1-201ENST00000616420 92 ntBASIC21.33■■□□□ 1.01
SSR4P51571 MIR6724-2-201ENST00000616483 92 ntBASIC21.33■■□□□ 1.01
SSR4P51571 MIR6724-4-201ENST00000617390 92 ntBASIC21.33■■□□□ 1.01
SSR4P51571 MIR6724-3-201ENST00000622482 92 ntBASIC21.33■■□□□ 1.01
SSR4P51571 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
SSR4P51571 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.32■■□□□ 1
SSR4P51571 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.32■■□□□ 1
SSR4P51571 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SSR4P51571 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SSR4P51571 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SSR4P51571 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.32■■□□□ 1
SSR4P51571 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SSR4P51571 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.32■■□□□ 1
SSR4P51571 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SSR4P51571 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SSR4P51571 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.31■■□□□ 1
SSR4P51571 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.31■■□□□ 1
SSR4P51571 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SSR4P51571 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SSR4P51571 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.31■■□□□ 1
SSR4P51571 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.31■■□□□ 1
SSR4P51571 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SSR4P51571 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.31■■□□□ 1
SSR4P51571 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SSR4P51571 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.3■■□□□ 1
SSR4P51571 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SSR4P51571 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.3■■□□□ 1
SSR4P51571 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
SSR4P51571 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.3■■□□□ 1
SSR4P51571 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.3■■□□□ 1
SSR4P51571 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.3■■□□□ 1
SSR4P51571 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.3■■□□□ 1
SSR4P51571 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.3■■□□□ 1
SSR4P51571 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.29■■□□□ 1
SSR4P51571 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SSR4P51571 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.29■■□□□ 1
SSR4P51571 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.29■■□□□ 1
SSR4P51571 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SSR4P51571 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.29■■□□□ 1
SSR4P51571 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.29■■□□□ 1
SSR4P51571 AC004448.1-201ENST00000458332 883 ntBASIC21.29■■□□□ 1
SSR4P51571 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.29■■□□□ 1
SSR4P51571 MIR6722-201ENST00000617286 78 ntBASIC21.29■■□□□ 1
SSR4P51571 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.29■■□□□ 1
SSR4P51571 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SSR4P51571 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
SSR4P51571 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.28■■□□□ 1
SSR4P51571 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SSR4P51571 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.28■■□□□ 1
SSR4P51571 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.28■■□□□ 1
SSR4P51571 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.28■■□□□ 1
SSR4P51571 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.28■■□□□ 1
SSR4P51571 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.28■■□□□ 1
SSR4P51571 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.28■■□□□ 1
SSR4P51571 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
SSR4P51571 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SSR4P51571 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.27■■□□□ 1
SSR4P51571 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SSR4P51571 AC022211.4-201ENST00000625094 2161 ntBASIC21.27■■□□□ 1
SSR4P51571 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.27■■□□□ 1
SSR4P51571 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.27■■□□□ 1
SSR4P51571 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.27■■□□□ 1
SSR4P51571 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.27■■□□□ 1
SSR4P51571 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.27■■□□□ 1
SSR4P51571 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SSR4P51571 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.27■□□□□ 0.99
SSR4P51571 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SSR4P51571 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SSR4P51571 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.26■□□□□ 0.99
SSR4P51571 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSR4P51571 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms