Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RAB5CP51148 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.64■□□□□ 0.58
RAB5CP51148 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RAB5CP51148 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RAB5CP51148 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB5CP51148 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RAB5CP51148 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB5CP51148 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB5CP51148 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB5CP51148 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB5CP51148 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB5CP51148 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB5CP51148 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB5CP51148 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB5CP51148 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB5CP51148 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB5CP51148 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RAB5CP51148 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB5CP51148 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB5CP51148 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB5CP51148 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB5CP51148 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.63■□□□□ 0.57
RAB5CP51148 SETD8P1-201ENST00000623146 1180 ntBASIC18.63■□□□□ 0.57
RAB5CP51148 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB5CP51148 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RAB5CP51148 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB5CP51148 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB5CP51148 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB5CP51148 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RAB5CP51148 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.63■□□□□ 0.57
RAB5CP51148 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB5CP51148 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB5CP51148 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB5CP51148 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RAB5CP51148 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB5CP51148 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB5CP51148 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB5CP51148 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB5CP51148 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB5CP51148 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB5CP51148 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB5CP51148 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB5CP51148 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB5CP51148 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
RAB5CP51148 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
RAB5CP51148 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB5CP51148 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB5CP51148 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB5CP51148 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB5CP51148 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB5CP51148 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB5CP51148 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RAB5CP51148 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.6■□□□□ 0.57
RAB5CP51148 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB5CP51148 C1orf229-201ENST00000623686 2258 ntBASIC18.6■□□□□ 0.57
RAB5CP51148 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB5CP51148 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB5CP51148 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RAB5CP51148 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB5CP51148 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
RAB5CP51148 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB5CP51148 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB5CP51148 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB5CP51148 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB5CP51148 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB5CP51148 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.59■□□□□ 0.57
RAB5CP51148 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB5CP51148 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB5CP51148 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
RAB5CP51148 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB5CP51148 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB5CP51148 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB5CP51148 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.58■□□□□ 0.57
RAB5CP51148 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RAB5CP51148 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB5CP51148 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.58■□□□□ 0.56
RAB5CP51148 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB5CP51148 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RAB5CP51148 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB5CP51148 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB5CP51148 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB5CP51148 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.57■□□□□ 0.56
RAB5CP51148 MIR6089-201ENST00000616698 64 ntBASIC18.57■□□□□ 0.56
RAB5CP51148 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB5CP51148 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB5CP51148 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB5CP51148 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB5CP51148 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB5CP51148 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB5CP51148 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB5CP51148 ECEL1P1-201ENST00000373592 1742 ntBASIC18.56■□□□□ 0.56
RAB5CP51148 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB5CP51148 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB5CP51148 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB5CP51148 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB5CP51148 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RAB5CP51148 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB5CP51148 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
RAB5CP51148 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB5CP51148 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms