Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CPT1AP50416 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
CPT1AP50416 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.01■■□□□ 1.75
CPT1AP50416 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.01■■□□□ 1.75
CPT1AP50416 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CPT1AP50416 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CPT1AP50416 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26■■□□□ 1.75
CPT1AP50416 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26■■□□□ 1.75
CPT1AP50416 AC142381.2-201ENST00000566120 298 ntBASIC26■■□□□ 1.75
CPT1AP50416 AL136162.1-201ENST00000607711 1078 ntBASIC26■■□□□ 1.75
CPT1AP50416 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CPT1AP50416 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.99■■□□□ 1.75
CPT1AP50416 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CPT1AP50416 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CPT1AP50416 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.99■■□□□ 1.75
CPT1AP50416 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
CPT1AP50416 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CPT1AP50416 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CPT1AP50416 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
CPT1AP50416 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
CPT1AP50416 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CPT1AP50416 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CPT1AP50416 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.97■■□□□ 1.75
CPT1AP50416 AC135279.3-201ENST00000610945 1311 ntBASIC25.97■■□□□ 1.75
CPT1AP50416 AC005703.6-201ENST00000623265 1329 ntBASIC25.97■■□□□ 1.75
CPT1AP50416 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
CPT1AP50416 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
CPT1AP50416 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
CPT1AP50416 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CPT1AP50416 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.96■■□□□ 1.75
CPT1AP50416 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
CPT1AP50416 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.96■■□□□ 1.75
CPT1AP50416 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.96■■□□□ 1.75
CPT1AP50416 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
CPT1AP50416 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.96■■□□□ 1.75
CPT1AP50416 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.96■■□□□ 1.75
CPT1AP50416 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
CPT1AP50416 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CPT1AP50416 AC092803.2-201ENST00000564287 1899 ntBASIC25.96■■□□□ 1.75
CPT1AP50416 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CPT1AP50416 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CPT1AP50416 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.95■■□□□ 1.74
CPT1AP50416 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
CPT1AP50416 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CPT1AP50416 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
CPT1AP50416 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.93■■□□□ 1.74
CPT1AP50416 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CPT1AP50416 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.93■■□□□ 1.74
CPT1AP50416 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.93■■□□□ 1.74
CPT1AP50416 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.93■■□□□ 1.74
CPT1AP50416 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CPT1AP50416 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CPT1AP50416 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.92■■□□□ 1.74
CPT1AP50416 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CPT1AP50416 EDA-201ENST00000338901 1233 ntBASIC25.92■■□□□ 1.74
CPT1AP50416 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.92■■□□□ 1.74
CPT1AP50416 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CPT1AP50416 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CPT1AP50416 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.92■■□□□ 1.74
CPT1AP50416 AL031432.3-201ENST00000607698 485 ntBASIC25.92■■□□□ 1.74
CPT1AP50416 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.92■■□□□ 1.74
CPT1AP50416 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
CPT1AP50416 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CPT1AP50416 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CPT1AP50416 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.92■■□□□ 1.74
CPT1AP50416 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.92■■□□□ 1.74
CPT1AP50416 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.92■■□□□ 1.74
CPT1AP50416 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CPT1AP50416 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.91■■□□□ 1.74
CPT1AP50416 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CPT1AP50416 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
CPT1AP50416 ZNRF2P3-201ENST00000424200 374 ntBASIC25.91■■□□□ 1.74
CPT1AP50416 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.91■■□□□ 1.74
CPT1AP50416 SUDS3P1-201ENST00000505831 966 ntBASIC25.91■■□□□ 1.74
CPT1AP50416 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.91■■□□□ 1.74
CPT1AP50416 AC024257.2-201ENST00000549699 147 ntBASIC25.91■■□□□ 1.74
CPT1AP50416 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CPT1AP50416 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CPT1AP50416 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CPT1AP50416 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CPT1AP50416 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CPT1AP50416 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CPT1AP50416 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CPT1AP50416 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.9■■□□□ 1.74
CPT1AP50416 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.9■■□□□ 1.74
CPT1AP50416 DUX4L19-201ENST00000557448 1267 ntBASIC25.9■■□□□ 1.74
CPT1AP50416 AL355001.2-201ENST00000620617 1191 ntBASIC25.9■■□□□ 1.74
CPT1AP50416 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
CPT1AP50416 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CPT1AP50416 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.9■■□□□ 1.74
CPT1AP50416 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
CPT1AP50416 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CPT1AP50416 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
CPT1AP50416 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
CPT1AP50416 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.89■■□□□ 1.74
CPT1AP50416 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CPT1AP50416 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
CPT1AP50416 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
CPT1AP50416 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
CPT1AP50416 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms