Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC30.46■■■□□ 2.47
PRIM1P49642 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
PRIM1P49642 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.47
PRIM1P49642 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
PRIM1P49642 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC30.45■■■□□ 2.47
PRIM1P49642 RBM38-205ENST00000440234 686 ntTSL 2 BASIC30.45■■■□□ 2.47
PRIM1P49642 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
PRIM1P49642 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
PRIM1P49642 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC30.45■■■□□ 2.47
PRIM1P49642 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC30.45■■■□□ 2.47
PRIM1P49642 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC30.45■■■□□ 2.47
PRIM1P49642 ANKRD20A6P-201ENST00000618763 204 ntBASIC30.45■■■□□ 2.47
PRIM1P49642 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC30.45■■■□□ 2.46
PRIM1P49642 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.45■■■□□ 2.46
PRIM1P49642 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC30.45■■■□□ 2.46
PRIM1P49642 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
PRIM1P49642 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
PRIM1P49642 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PRIM1P49642 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC30.44■■■□□ 2.46
PRIM1P49642 AP001330.3-201ENST00000520123 633 ntBASIC30.44■■■□□ 2.46
PRIM1P49642 MIR6821-201ENST00000617625 74 ntBASIC30.44■■■□□ 2.46
PRIM1P49642 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
PRIM1P49642 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PRIM1P49642 AC142086.6-201ENST00000621154 1765 ntBASIC30.43■■■□□ 2.46
PRIM1P49642 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.43■■■□□ 2.46
PRIM1P49642 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC30.43■■■□□ 2.46
PRIM1P49642 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.42■■■□□ 2.46
PRIM1P49642 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
PRIM1P49642 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
PRIM1P49642 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
PRIM1P49642 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
PRIM1P49642 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PRIM1P49642 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
PRIM1P49642 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
PRIM1P49642 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PRIM1P49642 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC30.4■■■□□ 2.46
PRIM1P49642 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PRIM1P49642 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PRIM1P49642 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PRIM1P49642 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
PRIM1P49642 PARL-206ENST00000435888 1098 ntTSL 5 BASIC30.39■■■□□ 2.46
PRIM1P49642 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC30.39■■■□□ 2.46
PRIM1P49642 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC30.39■■■□□ 2.46
PRIM1P49642 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC30.39■■■□□ 2.46
PRIM1P49642 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC30.39■■■□□ 2.46
PRIM1P49642 AC097381.1-201ENST00000429019 1296 ntBASIC30.38■■■□□ 2.45
PRIM1P49642 AC004448.1-201ENST00000458332 883 ntBASIC30.38■■■□□ 2.45
PRIM1P49642 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
PRIM1P49642 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
PRIM1P49642 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC30.37■■■□□ 2.45
PRIM1P49642 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PRIM1P49642 DUX4L19-201ENST00000557448 1267 ntBASIC30.37■■■□□ 2.45
PRIM1P49642 AC087623.3-201ENST00000607047 1098 ntBASIC30.37■■■□□ 2.45
PRIM1P49642 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
PRIM1P49642 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
PRIM1P49642 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC30.37■■■□□ 2.45
PRIM1P49642 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC30.37■■■□□ 2.45
PRIM1P49642 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC30.36■■■□□ 2.45
PRIM1P49642 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC30.36■■■□□ 2.45
PRIM1P49642 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PRIM1P49642 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC30.36■■■□□ 2.45
PRIM1P49642 AC091305.1-201ENST00000479476 895 ntBASIC30.36■■■□□ 2.45
PRIM1P49642 SF1-220ENST00000626028 704 ntTSL 2 BASIC30.36■■■□□ 2.45
PRIM1P49642 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PRIM1P49642 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PRIM1P49642 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC30.36■■■□□ 2.45
PRIM1P49642 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC30.35■■■□□ 2.45
PRIM1P49642 MAG-206ENST00000597035 542 ntTSL 4 BASIC30.35■■■□□ 2.45
PRIM1P49642 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC30.35■■■□□ 2.45
PRIM1P49642 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PRIM1P49642 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PRIM1P49642 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC30.34■■■□□ 2.45
PRIM1P49642 MIR4767-201ENST00000582827 78 ntBASIC30.34■■■□□ 2.45
PRIM1P49642 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
PRIM1P49642 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PRIM1P49642 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PRIM1P49642 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
PRIM1P49642 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PRIM1P49642 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PRIM1P49642 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
PRIM1P49642 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC30.32■■■□□ 2.44
PRIM1P49642 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PRIM1P49642 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PRIM1P49642 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC30.32■■■□□ 2.44
PRIM1P49642 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC30.32■■■□□ 2.44
PRIM1P49642 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PRIM1P49642 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PRIM1P49642 SYT6-210ENST00000641643 1587 ntBASIC30.32■■■□□ 2.44
PRIM1P49642 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC30.31■■■□□ 2.44
PRIM1P49642 AL162430.1-201ENST00000480705 870 ntBASIC30.31■■■□□ 2.44
PRIM1P49642 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
PRIM1P49642 AC005703.6-201ENST00000623265 1329 ntBASIC30.3■■■□□ 2.44
PRIM1P49642 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
PRIM1P49642 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
PRIM1P49642 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
PRIM1P49642 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC30.3■■■□□ 2.44
PRIM1P49642 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PRIM1P49642 AC096887.2-201ENST00000623443 1957 ntBASIC30.29■■■□□ 2.44
PRIM1P49642 PLD4-205ENST00000553861 667 ntTSL 2 BASIC30.29■■■□□ 2.44
PRIM1P49642 CA15P2-201ENST00000611168 834 ntBASIC30.29■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms