Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
CKS2P33552 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKS2P33552 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CKS2P33552 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKS2P33552 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.01■□□□□ 0.31
CKS2P33552 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CKS2P33552 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKS2P33552 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKS2P33552 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKS2P33552 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CKS2P33552 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CKS2P33552 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
CKS2P33552 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17■□□□□ 0.31
CKS2P33552 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CKS2P33552 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17■□□□□ 0.31
CKS2P33552 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
CKS2P33552 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17■□□□□ 0.31
CKS2P33552 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17■□□□□ 0.31
CKS2P33552 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CKS2P33552 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17■□□□□ 0.31
CKS2P33552 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CKS2P33552 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CKS2P33552 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CKS2P33552 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17■□□□□ 0.31
CKS2P33552 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17■□□□□ 0.31
CKS2P33552 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CKS2P33552 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CKS2P33552 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKS2P33552 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CKS2P33552 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CKS2P33552 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CKS2P33552 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKS2P33552 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CKS2P33552 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CKS2P33552 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.99■□□□□ 0.31
CKS2P33552 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
CKS2P33552 AL359258.2-201ENST00000564063 1566 ntBASIC16.98■□□□□ 0.31
CKS2P33552 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKS2P33552 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CKS2P33552 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKS2P33552 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.98■□□□□ 0.31
CKS2P33552 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CKS2P33552 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKS2P33552 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CKS2P33552 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKS2P33552 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CKS2P33552 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKS2P33552 AC233723.2-201ENST00000623798 2106 ntBASIC16.97■□□□□ 0.31
CKS2P33552 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKS2P33552 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKS2P33552 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKS2P33552 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.97■□□□□ 0.31
CKS2P33552 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKS2P33552 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.97■□□□□ 0.31
CKS2P33552 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CKS2P33552 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKS2P33552 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKS2P33552 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKS2P33552 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.96■□□□□ 0.31
CKS2P33552 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CKS2P33552 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CKS2P33552 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CKS2P33552 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKS2P33552 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC16.96■□□□□ 0.31
CKS2P33552 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKS2P33552 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKS2P33552 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CKS2P33552 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CKS2P33552 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CKS2P33552 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKS2P33552 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CKS2P33552 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKS2P33552 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CKS2P33552 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.96■□□□□ 0.3
CKS2P33552 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.96■□□□□ 0.3
CKS2P33552 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.95■□□□□ 0.3
CKS2P33552 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CKS2P33552 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CKS2P33552 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CKS2P33552 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.95■□□□□ 0.3
CKS2P33552 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CKS2P33552 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.95■□□□□ 0.3
CKS2P33552 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CKS2P33552 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CKS2P33552 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CKS2P33552 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CKS2P33552 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CKS2P33552 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CKS2P33552 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.94■□□□□ 0.3
CKS2P33552 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CKS2P33552 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CKS2P33552 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CKS2P33552 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CKS2P33552 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CKS2P33552 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CKS2P33552 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CKS2P33552 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CKS2P33552 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CKS2P33552 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CKS2P33552 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms