Protein–RNA interactions for Protein: P32842

VMA11, V-type proton ATPase subunit c', yeast

Predictions only

Length 164 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA11	P32842	RER2	YBR002C	861 nt		4.34	□□□□□ -1.71
VMA11	P32842	THI21	YPL258C	1656 nt		4.34	□□□□□ -1.71
VMA11	P32842	FOB1	YDR110W	1701 nt		4.34	□□□□□ -1.71
VMA11	P32842	ENT2	YLR206W	1842 nt		4.34	□□□□□ -1.71
VMA11	P32842	IES1	YFL013C	2079 nt		4.34	□□□□□ -1.71
VMA11	P32842	SEC39	YLR440C	2130 nt		4.34	□□□□□ -1.71
VMA11	P32842	PPR1	YLR014C	2715 nt		4.34	□□□□□ -1.72
VMA11	P32842	SNT2	YGL131C	4212 nt		4.34	□□□□□ -1.72
VMA11	P32842	PIF1	YML061C	2580 nt		4.33	□□□□□ -1.72
VMA11	P32842	HXT5	YHR096C	1779 nt		4.33	□□□□□ -1.72
VMA11	P32842	MTC1	YJL123C	1437 nt		4.33	□□□□□ -1.72
VMA11	P32842	CHO1	YER026C	831 nt		4.33	□□□□□ -1.72
VMA11	P32842	tR(ACG)J	tR(ACG)J	73 nt		4.33	□□□□□ -1.72
VMA11	P32842	PRP45	YAL032C	1140 nt		4.33	□□□□□ -1.72
VMA11	P32842	NOP7	YGR103W	1818 nt		4.32	□□□□□ -1.72
VMA11	P32842	MET7	YOR241W	1647 nt		4.32	□□□□□ -1.72
VMA11	P32842	VTH1	YIL173W	4650 nt		4.32	□□□□□ -1.72
VMA11	P32842	VTH2	YJL222W	4650 nt		4.32	□□□□□ -1.72
VMA11	P32842	HOS1	YPR068C	1413 nt		4.32	□□□□□ -1.72
VMA11	P32842	MTQ2	YDR140W	666 nt		4.32	□□□□□ -1.72
VMA11	P32842	JJJ3	YJR097W	519 nt		4.32	□□□□□ -1.72
VMA11	P32842	CTS2	YDR371W	1536 nt		4.31	□□□□□ -1.72
VMA11	P32842	YFL034W	YFL034W	3222 nt		4.31	□□□□□ -1.72
VMA11	P32842	HSF1	YGL073W	2502 nt		4.31	□□□□□ -1.72
VMA11	P32842	UTP18	YJL069C	1785 nt		4.31	□□□□□ -1.72
VMA11	P32842	YAP1	YML007W	1953 nt		4.31	□□□□□ -1.72
VMA11	P32842	YER084W	YER084W	387 nt		4.3	□□□□□ -1.72
VMA11	P32842	MTQ1	YNL063W	945 nt		4.3	□□□□□ -1.72
VMA11	P32842	YNR042W	YNR042W	429 nt		4.3	□□□□□ -1.72
VMA11	P32842	MKC7	YDR144C	1791 nt		4.3	□□□□□ -1.72
VMA11	P32842	PSE1	YMR308C	3270 nt		4.29	□□□□□ -1.72
VMA11	P32842	ULA1	YPL003W	1389 nt		4.29	□□□□□ -1.72
VMA11	P32842	EEB1	YPL095C	1371 nt		4.29	□□□□□ -1.72
VMA11	P32842	RFA1	YAR007C	1866 nt		4.29	□□□□□ -1.72
VMA11	P32842	SIA1	YOR137C	1869 nt		4.29	□□□□□ -1.72
VMA11	P32842	YDR134C	YDR134C	411 nt		4.29	□□□□□ -1.72
VMA11	P32842	SUA5	YGL169W	1281 nt		4.29	□□□□□ -1.72
VMA11	P32842	YIL060W	YIL060W	435 nt		4.29	□□□□□ -1.72
VMA11	P32842	YJU2	YKL095W	837 nt		4.29	□□□□□ -1.72
VMA11	P32842	ROX3	YBL093C	663 nt		4.29	□□□□□ -1.72
VMA11	P32842	SER1	YOR184W	1188 nt		4.29	□□□□□ -1.72
VMA11	P32842	PEX32	YBR168W	1242 nt		4.29	□□□□□ -1.72
VMA11	P32842	AVO1	YOL078W	3531 nt		4.29	□□□□□ -1.72
VMA11	P32842	ATG17	YLR423C	1254 nt		4.28	□□□□□ -1.72
VMA11	P32842	YMR010W	YMR010W	1218 nt		4.28	□□□□□ -1.72
VMA11	P32842	PFA3	YNL326C	1011 nt		4.28	□□□□□ -1.72
VMA11	P32842	SSK22	YCR073C	3996 nt		4.28	□□□□□ -1.72
VMA11	P32842	YNL247W	YNL247W	2304 nt		4.28	□□□□□ -1.72
VMA11	P32842	WTM2	YOR229W	1404 nt		4.28	□□□□□ -1.72
VMA11	P32842	SPC97	YHR172W	2472 nt		4.28	□□□□□ -1.72
VMA11	P32842	YHR182W	YHR182W	2358 nt		4.27	□□□□□ -1.73
VMA11	P32842	NOC4	YPR144C	1659 nt		4.27	□□□□□ -1.73
VMA11	P32842	PEX19	YDL065C	1029 nt		4.27	□□□□□ -1.73
VMA11	P32842	ECT1	YGR007W	972 nt		4.27	□□□□□ -1.73
VMA11	P32842	HRP1	YOL123W	1605 nt		4.27	□□□□□ -1.73
VMA11	P32842	AIM17	YHL021C	1398 nt		4.27	□□□□□ -1.73
VMA11	P32842	RET1	YOR207C	3450 nt		4.26	□□□□□ -1.73
VMA11	P32842	ECM7	YLR443W	1347 nt		4.26	□□□□□ -1.73
VMA11	P32842	TOS3	YGL179C	1683 nt		4.26	□□□□□ -1.73
VMA11	P32842	GRS1	YBR121C	2004 nt		4.26	□□□□□ -1.73
VMA11	P32842	YFR035C	YFR035C	345 nt		4.26	□□□□□ -1.73
VMA11	P32842	YPT32	YGL210W	669 nt		4.26	□□□□□ -1.73
VMA11	P32842	PDE1	YGL248W	1110 nt		4.26	□□□□□ -1.73
VMA11	P32842	CAX4	YGR036C	720 nt		4.26	□□□□□ -1.73
VMA11	P32842	CTR2	YHR175W	570 nt		4.26	□□□□□ -1.73
VMA11	P32842	YKL107W	YKL107W	930 nt		4.26	□□□□□ -1.73
VMA11	P32842	YNL296W	YNL296W	315 nt		4.26	□□□□□ -1.73
VMA11	P32842	GPM3	YOL056W	912 nt		4.26	□□□□□ -1.73
VMA11	P32842	ASH1	YKL185W	1767 nt		4.26	□□□□□ -1.73
VMA11	P32842	QRI1	YDL103C	1434 nt		4.26	□□□□□ -1.73
VMA11	P32842	MSS116	YDR194C	1995 nt		4.25	□□□□□ -1.73
VMA11	P32842	NPL6	YMR091C	1308 nt		4.25	□□□□□ -1.73
VMA11	P32842	YDL121C	YDL121C	450 nt		4.25	□□□□□ -1.73
VMA11	P32842	ARN2	YHL047C	1863 nt		4.25	□□□□□ -1.73
VMA11	P32842	BUD28	YLR062C	378 nt		4.25	□□□□□ -1.73
VMA11	P32842	RPS19B	YNL302C	435 nt		4.25	□□□□□ -1.73
VMA11	P32842	NRD1	YNL251C	1728 nt		4.24	□□□□□ -1.73
VMA11	P32842	STE20	YHL007C	2820 nt		4.24	□□□□□ -1.73
VMA11	P32842	COQ6	YGR255C	1440 nt		4.24	□□□□□ -1.73
VMA11	P32842	SEC12	YNR026C	1416 nt		4.24	□□□□□ -1.73
VMA11	P32842	YCR075W-A	YCR075W-A	228 nt		4.24	□□□□□ -1.73
VMA11	P32842	SIP2	YGL208W	1248 nt		4.24	□□□□□ -1.73
VMA11	P32842	YBL044W	YBL044W	369 nt		4.24	□□□□□ -1.73
VMA11	P32842	PSH1	YOL054W	1221 nt		4.24	□□□□□ -1.73
VMA11	P32842	PDC1	YLR044C	1692 nt		4.24	□□□□□ -1.73
VMA11	P32842	ADE6	YGR061C	4077 nt		4.24	□□□□□ -1.73
VMA11	P32842	RPT2	YDL007W	1314 nt		4.23	□□□□□ -1.73
VMA11	P32842	TUP1	YCR084C	2142 nt		4.23	□□□□□ -1.73
VMA11	P32842	PRE7	YBL041W	726 nt		4.23	□□□□□ -1.73
VMA11	P32842	FET3	YMR058W	1911 nt		4.23	□□□□□ -1.73
VMA11	P32842	GAL10	YBR019C	2100 nt		4.22	□□□□□ -1.73
VMA11	P32842	BPL1	YDL141W	2073 nt		4.22	□□□□□ -1.73
VMA11	P32842	SRG1	SRG1	551 nt		4.22	□□□□□ -1.73
VMA11	P32842	YDR053W	YDR053W	396 nt		4.22	□□□□□ -1.73
VMA11	P32842	YEL077C	YEL077C	3834 nt		4.22	□□□□□ -1.73
VMA11	P32842	RPN12	YFR052W	825 nt		4.22	□□□□□ -1.73
VMA11	P32842	REV7	YIL139C	738 nt		4.22	□□□□□ -1.73
VMA11	P32842	YMR135W-A	YMR135W-A	534 nt		4.22	□□□□□ -1.73
VMA11	P32842	HLJ1	YMR161W	675 nt		4.22	□□□□□ -1.73
VMA11	P32842	BUB3	YOR026W	1026 nt		4.22	□□□□□ -1.73

Retrieved 100 of 7,029 protein–RNA pairs in 58.6 ms