Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20■□□□□ 0.79
SLC6A1P30531 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20■□□□□ 0.79
SLC6A1P30531 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SLC6A1P30531 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SLC6A1P30531 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SLC6A1P30531 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20■□□□□ 0.79
SLC6A1P30531 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC6A1P30531 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC6A1P30531 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A1P30531 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A1P30531 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A1P30531 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A1P30531 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A1P30531 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.99■□□□□ 0.79
SLC6A1P30531 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A1P30531 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A1P30531 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A1P30531 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC6A1P30531 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
SLC6A1P30531 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC6A1P30531 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
SLC6A1P30531 C1orf229-201ENST00000623686 2258 ntBASIC19.98■□□□□ 0.79
SLC6A1P30531 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.98■□□□□ 0.79
SLC6A1P30531 LINC00526-201ENST00000581067 1875 ntBASIC19.98■□□□□ 0.79
SLC6A1P30531 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC6A1P30531 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC6A1P30531 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A1P30531 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A1P30531 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC6A1P30531 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A1P30531 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A1P30531 AC127496.7-201ENST00000625110 1798 ntBASIC19.97■□□□□ 0.79
SLC6A1P30531 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A1P30531 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A1P30531 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A1P30531 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A1P30531 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A1P30531 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SLC6A1P30531 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.96■□□□□ 0.79
SLC6A1P30531 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.96■□□□□ 0.79
SLC6A1P30531 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A1P30531 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.96■□□□□ 0.79
SLC6A1P30531 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A1P30531 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A1P30531 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SLC6A1P30531 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
SLC6A1P30531 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A1P30531 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
SLC6A1P30531 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC6A1P30531 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC6A1P30531 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC6A1P30531 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A1P30531 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A1P30531 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A1P30531 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.95■□□□□ 0.78
SLC6A1P30531 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.95■□□□□ 0.78
SLC6A1P30531 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A1P30531 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
SLC6A1P30531 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A1P30531 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.95■□□□□ 0.78
SLC6A1P30531 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC6A1P30531 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SLC6A1P30531 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A1P30531 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC6A1P30531 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A1P30531 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SLC6A1P30531 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SLC6A1P30531 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A1P30531 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A1P30531 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A1P30531 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A1P30531 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A1P30531 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A1P30531 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SLC6A1P30531 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.92■□□□□ 0.78
SLC6A1P30531 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A1P30531 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SLC6A1P30531 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A1P30531 AC008813.1-201ENST00000536597 885 ntBASIC19.92■□□□□ 0.78
SLC6A1P30531 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SLC6A1P30531 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A1P30531 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A1P30531 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC6A1P30531 AC007375.3-201ENST00000600936 2314 ntBASIC19.91■□□□□ 0.78
SLC6A1P30531 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC6A1P30531 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC6A1P30531 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC6A1P30531 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC6A1P30531 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.91■□□□□ 0.78
SLC6A1P30531 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC6A1P30531 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SLC6A1P30531 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.91■□□□□ 0.78
SLC6A1P30531 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SLC6A1P30531 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC6A1P30531 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC6A1P30531 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC6A1P30531 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC6A1P30531 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC6A1P30531 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC6A1P30531 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms